Hb_000018_170

Information

Type -
Description -
Location Contig18: 206696-210318
Sequence    

Annotation

kegg
ID vvi:100242385
description bark storage protein A
nr
ID XP_012077415.1
description PREDICTED: bark storage protein A-like [Jatropha curcas]
swissprot
ID Q09117
description Bark storage protein B OS=Populus deltoides GN=BSP PE=1 SV=1
trembl
ID A0A067KPI6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07761 PE=4 SV=1
Gene Ontology
ID GO:0003824
description bark storage protein a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17429: 206628-209731 , PASA_asmbl_17430: 209765-210337
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000018_170 0.0 - - PREDICTED: bark storage protein A-like [Jatropha curcas]
2 Hb_061256_030 0.1565565179 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
3 Hb_003226_170 0.1616718598 - - PREDICTED: poly [ADP-ribose] polymerase 2 isoform X1 [Jatropha curcas]
4 Hb_007111_040 0.1762532979 - - PREDICTED: uncharacterized protein LOC105628142 isoform X1 [Jatropha curcas]
5 Hb_000256_270 0.1819146414 - - PREDICTED: large proline-rich protein bag6-B isoform X1 [Jatropha curcas]
6 Hb_003580_040 0.182259246 - - PREDICTED: protein ENHANCED DOWNY MILDEW 2-like [Jatropha curcas]
7 Hb_005784_080 0.1836043928 - - kinase, putative [Ricinus communis]
8 Hb_002837_070 0.1848939154 - - PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 8-like isoform X1 [Jatropha curcas]
9 Hb_009421_100 0.1899651496 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os01g0234100-like [Jatropha curcas]
10 Hb_000566_140 0.1910635656 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 16 [Jatropha curcas]
11 Hb_002769_040 0.191212788 - - farnesyl-diphosphate farnesyltransferase, putative [Ricinus communis]
12 Hb_000565_020 0.1931475009 - - PREDICTED: alpha-galactosidase 3 [Jatropha curcas]
13 Hb_002955_010 0.1967302182 - - PREDICTED: Werner syndrome ATP-dependent helicase homolog [Jatropha curcas]
14 Hb_000028_050 0.19956378 - - aldose-1-epimerase, putative [Ricinus communis]
15 Hb_002290_060 0.2006725677 - - o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis]
16 Hb_000056_120 0.2010045342 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
17 Hb_000210_130 0.2015268368 - - PREDICTED: chaperone protein ClpB4, mitochondrial [Vitis vinifera]
18 Hb_007757_100 0.202123488 - - PREDICTED: ER membrane protein complex subunit 3-like [Jatropha curcas]
19 Hb_000173_210 0.2030706033 - - PREDICTED: serine incorporator 3 [Jatropha curcas]
20 Hb_005271_030 0.2042241538 - - copper-transporting atpase p-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_000018_170 Hb_000018_170 Hb_061256_030 Hb_061256_030 Hb_000018_170--Hb_061256_030 Hb_003226_170 Hb_003226_170 Hb_000018_170--Hb_003226_170 Hb_007111_040 Hb_007111_040 Hb_000018_170--Hb_007111_040 Hb_000256_270 Hb_000256_270 Hb_000018_170--Hb_000256_270 Hb_003580_040 Hb_003580_040 Hb_000018_170--Hb_003580_040 Hb_005784_080 Hb_005784_080 Hb_000018_170--Hb_005784_080 Hb_002837_070 Hb_002837_070 Hb_061256_030--Hb_002837_070 Hb_061256_030--Hb_003226_170 Hb_003673_020 Hb_003673_020 Hb_061256_030--Hb_003673_020 Hb_174865_050 Hb_174865_050 Hb_061256_030--Hb_174865_050 Hb_010189_010 Hb_010189_010 Hb_061256_030--Hb_010189_010 Hb_009421_100 Hb_009421_100 Hb_061256_030--Hb_009421_100 Hb_003226_170--Hb_003673_020 Hb_003226_170--Hb_002837_070 Hb_001846_080 Hb_001846_080 Hb_003226_170--Hb_001846_080 Hb_003226_170--Hb_174865_050 Hb_005016_150 Hb_005016_150 Hb_003226_170--Hb_005016_150 Hb_011644_020 Hb_011644_020 Hb_007111_040--Hb_011644_020 Hb_019871_020 Hb_019871_020 Hb_007111_040--Hb_019871_020 Hb_000392_280 Hb_000392_280 Hb_007111_040--Hb_000392_280 Hb_000300_540 Hb_000300_540 Hb_007111_040--Hb_000300_540 Hb_006029_010 Hb_006029_010 Hb_007111_040--Hb_006029_010 Hb_000684_180 Hb_000684_180 Hb_007111_040--Hb_000684_180 Hb_002955_010 Hb_002955_010 Hb_000256_270--Hb_002955_010 Hb_001477_010 Hb_001477_010 Hb_000256_270--Hb_001477_010 Hb_000565_020 Hb_000565_020 Hb_000256_270--Hb_000565_020 Hb_023327_030 Hb_023327_030 Hb_000256_270--Hb_023327_030 Hb_113216_010 Hb_113216_010 Hb_000256_270--Hb_113216_010 Hb_000372_040 Hb_000372_040 Hb_000256_270--Hb_000372_040 Hb_007757_100 Hb_007757_100 Hb_003580_040--Hb_007757_100 Hb_000181_310 Hb_000181_310 Hb_003580_040--Hb_000181_310 Hb_003666_050 Hb_003666_050 Hb_003580_040--Hb_003666_050 Hb_000608_340 Hb_000608_340 Hb_003580_040--Hb_000608_340 Hb_003580_040--Hb_019871_020 Hb_001195_030 Hb_001195_030 Hb_003580_040--Hb_001195_030 Hb_001341_050 Hb_001341_050 Hb_005784_080--Hb_001341_050 Hb_000176_110 Hb_000176_110 Hb_005784_080--Hb_000176_110 Hb_003352_050 Hb_003352_050 Hb_005784_080--Hb_003352_050 Hb_033642_020 Hb_033642_020 Hb_005784_080--Hb_033642_020 Hb_000997_020 Hb_000997_020 Hb_005784_080--Hb_000997_020 Hb_000172_120 Hb_000172_120 Hb_005784_080--Hb_000172_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
54.8887 2.79412 21.4066 12.9283 91.3145 97.5013
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
47.4998 10.2237 13.2717 0.70645 1.07285

CAGE analysis