Hb_154623_010

Information

Type -
Description -
Location Contig154623: 691-1209
Sequence    

Annotation

kegg
ID rcu:RCOM_1748120
description 6-phosphogluconolactonase, putative (EC:3.1.1.31)
nr
ID XP_012072701.1
description PREDICTED: probable 6-phosphogluconolactonase 4, chloroplastic [Jatropha curcas]
swissprot
ID Q84WW2
description Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1
trembl
ID A0A067L110
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06435 PE=4 SV=1
Gene Ontology
ID GO:0005777
description probable 6-phosphogluconolactonase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_154623_010 0.0 - - PREDICTED: probable 6-phosphogluconolactonase 4, chloroplastic [Jatropha curcas]
2 Hb_000002_340 0.1173161403 - - PREDICTED: peroxisomal bifunctional enzyme-like [Jatropha curcas]
3 Hb_000221_210 0.1216479186 - - Kinase superfamily protein isoform 2 [Theobroma cacao]
4 Hb_000930_030 0.1271365782 - - PREDICTED: uncharacterized protein LOC105629651 [Jatropha curcas]
5 Hb_029879_110 0.1303966644 - - PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Jatropha curcas]
6 Hb_030385_010 0.1345637673 - - PREDICTED: zinc-binding alcohol dehydrogenase domain-containing protein 2-like [Jatropha curcas]
7 Hb_000000_460 0.1346921898 - - PREDICTED: peroxisomal membrane protein 11A [Jatropha curcas]
8 Hb_000220_220 0.1355674598 - - PREDICTED: uncharacterized protein LOC105636907 [Jatropha curcas]
9 Hb_000086_060 0.1359856734 - - PREDICTED: TOM1-like protein 2 isoform X2 [Populus euphratica]
10 Hb_000613_090 0.1366859555 - - PREDICTED: uncharacterized protein LOC105641542 isoform X1 [Jatropha curcas]
11 Hb_011249_010 0.1367578079 - - PREDICTED: N-alpha-acetyltransferase 35, NatC auxiliary subunit isoform X1 [Jatropha curcas]
12 Hb_000031_060 0.1383837263 - - PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Jatropha curcas]
13 Hb_003057_100 0.1393748535 - - PREDICTED: LOW QUALITY PROTEIN: S-adenosylmethionine mitochondrial carrier protein-like [Malus domestica]
14 Hb_011671_430 0.1402036962 - - PREDICTED: uncharacterized protein LOC105648668 [Jatropha curcas]
15 Hb_001541_230 0.1408377875 - - unnamed protein product [Vitis vinifera]
16 Hb_000679_010 0.1411233838 - - PREDICTED: uncharacterized protein LOC105637663 [Jatropha curcas]
17 Hb_000445_180 0.1427663455 transcription factor TF Family: TRAF PREDICTED: BTB/POZ domain-containing protein At4g08455 [Jatropha curcas]
18 Hb_010485_020 0.143798165 - - PREDICTED: thaumatin-like protein 1b isoform X1 [Jatropha curcas]
19 Hb_000227_090 0.1438379923 - - PREDICTED: NEDD8-activating enzyme E1 catalytic subunit [Jatropha curcas]
20 Hb_009615_150 0.1451147761 - - PREDICTED: transcription elongation factor SPT4 homolog 2 [Jatropha curcas]

Gene co-expression network

sample Hb_154623_010 Hb_154623_010 Hb_000002_340 Hb_000002_340 Hb_154623_010--Hb_000002_340 Hb_000221_210 Hb_000221_210 Hb_154623_010--Hb_000221_210 Hb_000930_030 Hb_000930_030 Hb_154623_010--Hb_000930_030 Hb_029879_110 Hb_029879_110 Hb_154623_010--Hb_029879_110 Hb_030385_010 Hb_030385_010 Hb_154623_010--Hb_030385_010 Hb_000000_460 Hb_000000_460 Hb_154623_010--Hb_000000_460 Hb_000002_340--Hb_000930_030 Hb_000732_010 Hb_000732_010 Hb_000002_340--Hb_000732_010 Hb_000958_110 Hb_000958_110 Hb_000002_340--Hb_000958_110 Hb_002107_030 Hb_002107_030 Hb_000002_340--Hb_002107_030 Hb_003057_100 Hb_003057_100 Hb_000002_340--Hb_003057_100 Hb_001396_200 Hb_001396_200 Hb_000002_340--Hb_001396_200 Hb_000696_340 Hb_000696_340 Hb_000221_210--Hb_000696_340 Hb_000086_060 Hb_000086_060 Hb_000221_210--Hb_000086_060 Hb_000445_180 Hb_000445_180 Hb_000221_210--Hb_000445_180 Hb_002137_020 Hb_002137_020 Hb_000221_210--Hb_002137_020 Hb_005941_040 Hb_005941_040 Hb_000221_210--Hb_005941_040 Hb_000221_210--Hb_003057_100 Hb_002232_410 Hb_002232_410 Hb_000930_030--Hb_002232_410 Hb_000930_030--Hb_000732_010 Hb_005054_230 Hb_005054_230 Hb_000930_030--Hb_005054_230 Hb_010519_050 Hb_010519_050 Hb_000930_030--Hb_010519_050 Hb_005271_220 Hb_005271_220 Hb_000930_030--Hb_005271_220 Hb_000220_220 Hb_000220_220 Hb_029879_110--Hb_000220_220 Hb_000116_440 Hb_000116_440 Hb_029879_110--Hb_000116_440 Hb_004310_030 Hb_004310_030 Hb_029879_110--Hb_004310_030 Hb_000062_550 Hb_000062_550 Hb_029879_110--Hb_000062_550 Hb_005064_060 Hb_005064_060 Hb_029879_110--Hb_005064_060 Hb_011883_010 Hb_011883_010 Hb_029879_110--Hb_011883_010 Hb_001541_230 Hb_001541_230 Hb_030385_010--Hb_001541_230 Hb_007086_010 Hb_007086_010 Hb_030385_010--Hb_007086_010 Hb_004577_020 Hb_004577_020 Hb_030385_010--Hb_004577_020 Hb_010417_080 Hb_010417_080 Hb_030385_010--Hb_010417_080 Hb_000207_120 Hb_000207_120 Hb_030385_010--Hb_000207_120 Hb_106724_020 Hb_106724_020 Hb_030385_010--Hb_106724_020 Hb_005054_290 Hb_005054_290 Hb_000000_460--Hb_005054_290 Hb_001102_140 Hb_001102_140 Hb_000000_460--Hb_001102_140 Hb_001439_100 Hb_001439_100 Hb_000000_460--Hb_001439_100 Hb_000705_210 Hb_000705_210 Hb_000000_460--Hb_000705_210 Hb_000679_010 Hb_000679_010 Hb_000000_460--Hb_000679_010 Hb_000329_630 Hb_000329_630 Hb_000000_460--Hb_000329_630
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
200.555 183.295 78.8451 144.224 226.609 91.2385
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
397.671 152.051 122.299 117.448 72.3847

CAGE analysis