Hb_153054_010

Information

Type -
Description -
Location Contig153054: 114-1213
Sequence    

Annotation

kegg
ID cmo:103500184
description metal tolerance protein 11
nr
ID XP_011016554.1
description PREDICTED: metal tolerance protein 11-like [Populus euphratica]
swissprot
ID Q5NA18
description Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1
trembl
ID A0A0A0KLS8
description Uncharacterized protein OS=Cucumis sativus GN=Csa_5G179780 PE=4 SV=1
Gene Ontology
ID GO:0005770
description metal tolerance protein 11 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_153054_010 0.0 - - PREDICTED: metal tolerance protein 11-like [Populus euphratica]
2 Hb_002217_310 0.1084703462 - - PREDICTED: ER membrane protein complex subunit 6 [Jatropha curcas]
3 Hb_000849_070 0.1200868063 - - PREDICTED: uncharacterized protein LOC105644190 [Jatropha curcas]
4 Hb_000183_040 0.1257577661 - - mannose-1-phosphate guanyltransferase, putative [Ricinus communis]
5 Hb_005539_290 0.126077189 - - unknown [Lotus japonicus]
6 Hb_050455_010 0.1264493117 - - PREDICTED: prosaposin isoform X2 [Jatropha curcas]
7 Hb_000069_160 0.1268257974 - - -
8 Hb_004143_110 0.1273806241 - - PREDICTED: uncharacterized protein LOC105630719 isoform X2 [Jatropha curcas]
9 Hb_012305_050 0.1282006929 - - unnamed protein product [Coffea canephora]
10 Hb_001124_210 0.128948507 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000045_070 0.1289542497 - - conserved hypothetical protein [Ricinus communis]
12 Hb_009543_030 0.130352132 - - prefoldin subunit 1 [Jatropha curcas]
13 Hb_000703_090 0.1308981215 - - PREDICTED: 14-3-3-like protein D [Cucumis sativus]
14 Hb_001246_100 0.1321222966 - - Ras-related small GTP-binding family protein [Theobroma cacao]
15 Hb_034585_030 0.1330517097 transcription factor TF Family: C2C2-Dof dof zinc finger protein DOF3.4 [Jatropha curcas]
16 Hb_000510_090 0.1342653656 - - 40S ribosomal protein S15 [Morus notabilis]
17 Hb_004453_150 0.1351270626 - - BnaC02g13240D [Brassica napus]
18 Hb_006252_010 0.1375321106 - - PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1 [Jatropha curcas]
19 Hb_116596_010 0.1384320952 - - PREDICTED: probable receptor-like protein kinase At5g47070-like isoform X1 [Citrus sinensis]
20 Hb_006487_050 0.139216819 - - hypothetical protein PHAVU_005G049600g [Phaseolus vulgaris]

Gene co-expression network

sample Hb_153054_010 Hb_153054_010 Hb_002217_310 Hb_002217_310 Hb_153054_010--Hb_002217_310 Hb_000849_070 Hb_000849_070 Hb_153054_010--Hb_000849_070 Hb_000183_040 Hb_000183_040 Hb_153054_010--Hb_000183_040 Hb_005539_290 Hb_005539_290 Hb_153054_010--Hb_005539_290 Hb_050455_010 Hb_050455_010 Hb_153054_010--Hb_050455_010 Hb_000069_160 Hb_000069_160 Hb_153054_010--Hb_000069_160 Hb_002217_310--Hb_000069_160 Hb_141131_010 Hb_141131_010 Hb_002217_310--Hb_141131_010 Hb_002217_310--Hb_000849_070 Hb_001124_210 Hb_001124_210 Hb_002217_310--Hb_001124_210 Hb_021409_020 Hb_021409_020 Hb_002217_310--Hb_021409_020 Hb_003847_080 Hb_003847_080 Hb_002217_310--Hb_003847_080 Hb_000849_070--Hb_000069_160 Hb_000849_070--Hb_050455_010 Hb_000849_070--Hb_001124_210 Hb_000849_070--Hb_003847_080 Hb_002400_070 Hb_002400_070 Hb_000849_070--Hb_002400_070 Hb_000183_040--Hb_050455_010 Hb_000183_040--Hb_000069_160 Hb_003656_140 Hb_003656_140 Hb_000183_040--Hb_003656_140 Hb_137403_010 Hb_137403_010 Hb_000183_040--Hb_137403_010 Hb_150360_010 Hb_150360_010 Hb_000183_040--Hb_150360_010 Hb_002023_020 Hb_002023_020 Hb_000183_040--Hb_002023_020 Hb_001902_050 Hb_001902_050 Hb_005539_290--Hb_001902_050 Hb_006602_020 Hb_006602_020 Hb_005539_290--Hb_006602_020 Hb_002154_050 Hb_002154_050 Hb_005539_290--Hb_002154_050 Hb_000700_090 Hb_000700_090 Hb_005539_290--Hb_000700_090 Hb_006602_010 Hb_006602_010 Hb_005539_290--Hb_006602_010 Hb_000671_100 Hb_000671_100 Hb_005539_290--Hb_000671_100 Hb_050455_010--Hb_000069_160 Hb_002982_040 Hb_002982_040 Hb_050455_010--Hb_002982_040 Hb_050455_010--Hb_003847_080 Hb_185830_020 Hb_185830_020 Hb_050455_010--Hb_185830_020 Hb_012305_050 Hb_012305_050 Hb_050455_010--Hb_012305_050 Hb_000069_160--Hb_002982_040 Hb_000069_160--Hb_003847_080 Hb_003502_080 Hb_003502_080 Hb_000069_160--Hb_003502_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
139.187 51.7295 16.9354 145.075 167.014 398.94
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
226.419 159.447 169.106 85.5543 4.86654

CAGE analysis