Hb_131748_010

Information

Type -
Description -
Location Contig131748: 1953-3011
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa022115mg
description hypothetical protein
nr
ID XP_007203452.1
description hypothetical protein PRUPE_ppa022115mg [Prunus persica]
swissprot
ID -
description -
trembl
ID M5VU98
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022115mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_131748_010 0.0 - - hypothetical protein PRUPE_ppa022115mg [Prunus persica]
2 Hb_000340_170 0.0057988579 - - PREDICTED: GDSL esterase/lipase At1g54790-like [Jatropha curcas]
3 Hb_156212_010 0.0058838065 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
4 Hb_000002_020 0.0066404684 - - PREDICTED: ALA-interacting subunit 3-like [Jatropha curcas]
5 Hb_000134_140 0.0082495737 - - lipid binding protein, putative [Ricinus communis]
6 Hb_004918_020 0.0083029238 - - -
7 Hb_003018_220 0.0086254822 - - Snakin-2 [Gossypium arboreum]
8 Hb_004957_040 0.0115780312 - - PREDICTED: uncharacterized protein LOC104890338 [Beta vulgaris subsp. vulgaris]
9 Hb_001491_080 0.0122317459 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000803_280 0.0130791591 - - PREDICTED: uncharacterized protein LOC105648326 [Jatropha curcas]
11 Hb_037000_010 0.0134186287 - - PREDICTED: putative germin-like protein 2-1 [Jatropha curcas]
12 Hb_158909_010 0.0164094221 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
13 Hb_003251_020 0.0171303525 - - Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B [Gossypium arboreum]
14 Hb_000107_690 0.017362719 - - zinc finger protein, putative [Ricinus communis]
15 Hb_000813_110 0.0188016936 - - PREDICTED: uncharacterized protein LOC104884346 [Beta vulgaris subsp. vulgaris]
16 Hb_086639_110 0.0216061349 transcription factor TF Family: G2-like DNA binding protein, putative [Theobroma cacao]
17 Hb_000330_010 0.0217591084 - - hypothetical protein POPTR_0005s25020g [Populus trichocarpa]
18 Hb_000397_180 0.0266907319 - - -
19 Hb_000130_430 0.0267129085 - - PREDICTED: UDP-glycosyltransferase 79B6-like [Jatropha curcas]
20 Hb_001136_150 0.0274359536 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_131748_010 Hb_131748_010 Hb_000340_170 Hb_000340_170 Hb_131748_010--Hb_000340_170 Hb_156212_010 Hb_156212_010 Hb_131748_010--Hb_156212_010 Hb_000002_020 Hb_000002_020 Hb_131748_010--Hb_000002_020 Hb_000134_140 Hb_000134_140 Hb_131748_010--Hb_000134_140 Hb_004918_020 Hb_004918_020 Hb_131748_010--Hb_004918_020 Hb_003018_220 Hb_003018_220 Hb_131748_010--Hb_003018_220 Hb_000340_170--Hb_156212_010 Hb_000340_170--Hb_000002_020 Hb_000340_170--Hb_004918_020 Hb_000340_170--Hb_003018_220 Hb_001491_080 Hb_001491_080 Hb_000340_170--Hb_001491_080 Hb_156212_010--Hb_000002_020 Hb_156212_010--Hb_004918_020 Hb_156212_010--Hb_003018_220 Hb_156212_010--Hb_001491_080 Hb_000002_020--Hb_004918_020 Hb_000002_020--Hb_003018_220 Hb_000002_020--Hb_001491_080 Hb_000803_280 Hb_000803_280 Hb_000002_020--Hb_000803_280 Hb_004957_040 Hb_004957_040 Hb_000134_140--Hb_004957_040 Hb_037000_010 Hb_037000_010 Hb_000134_140--Hb_037000_010 Hb_158909_010 Hb_158909_010 Hb_000134_140--Hb_158909_010 Hb_003251_020 Hb_003251_020 Hb_000134_140--Hb_003251_020 Hb_000107_690 Hb_000107_690 Hb_000134_140--Hb_000107_690 Hb_004918_020--Hb_003018_220 Hb_004918_020--Hb_001491_080 Hb_004918_020--Hb_000803_280 Hb_003018_220--Hb_001491_080 Hb_003018_220--Hb_000803_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0207084 0.0958145 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis