Hb_001491_080

Information

Type -
Description -
Location Contig1491: 98494-99713
Sequence    

Annotation

kegg
ID rcu:RCOM_0699140
description hypothetical protein
nr
ID XP_002520169.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q9LMN7
description Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1
trembl
ID B9S2F0
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0699140 PE=4 SV=1
Gene Ontology
ID GO:0016301
description wall-associated receptor kinase-like 20

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001491_080 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000803_280 0.0008475326 - - PREDICTED: uncharacterized protein LOC105648326 [Jatropha curcas]
3 Hb_003018_220 0.0036065959 - - Snakin-2 [Gossypium arboreum]
4 Hb_004918_020 0.0039291702 - - -
5 Hb_000002_020 0.0055916725 - - PREDICTED: ALA-interacting subunit 3-like [Jatropha curcas]
6 Hb_156212_010 0.0063483362 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
7 Hb_000340_170 0.0064332842 - - PREDICTED: GDSL esterase/lipase At1g54790-like [Jatropha curcas]
8 Hb_000813_110 0.0065712929 - - PREDICTED: uncharacterized protein LOC104884346 [Beta vulgaris subsp. vulgaris]
9 Hb_131748_010 0.0122317459 - - hypothetical protein PRUPE_ppa022115mg [Prunus persica]
10 Hb_000397_180 0.0144632539 - - -
11 Hb_102179_020 0.0158129734 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
12 Hb_002007_030 0.0172247234 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000134_140 0.0204795725 - - lipid binding protein, putative [Ricinus communis]
14 Hb_004957_040 0.0238069444 - - PREDICTED: uncharacterized protein LOC104890338 [Beta vulgaris subsp. vulgaris]
15 Hb_037000_010 0.0256468501 - - PREDICTED: putative germin-like protein 2-1 [Jatropha curcas]
16 Hb_007227_020 0.0281919723 - - -
17 Hb_000679_180 0.028610872 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
18 Hb_158909_010 0.0286363823 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
19 Hb_006663_120 0.0289077939 - - ATP binding protein, putative [Ricinus communis]
20 Hb_003251_020 0.0293569836 - - Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B [Gossypium arboreum]

Gene co-expression network

sample Hb_001491_080 Hb_001491_080 Hb_000803_280 Hb_000803_280 Hb_001491_080--Hb_000803_280 Hb_003018_220 Hb_003018_220 Hb_001491_080--Hb_003018_220 Hb_004918_020 Hb_004918_020 Hb_001491_080--Hb_004918_020 Hb_000002_020 Hb_000002_020 Hb_001491_080--Hb_000002_020 Hb_156212_010 Hb_156212_010 Hb_001491_080--Hb_156212_010 Hb_000340_170 Hb_000340_170 Hb_001491_080--Hb_000340_170 Hb_000803_280--Hb_003018_220 Hb_000803_280--Hb_004918_020 Hb_000813_110 Hb_000813_110 Hb_000803_280--Hb_000813_110 Hb_000803_280--Hb_000002_020 Hb_000803_280--Hb_156212_010 Hb_003018_220--Hb_004918_020 Hb_003018_220--Hb_000002_020 Hb_003018_220--Hb_156212_010 Hb_003018_220--Hb_000340_170 Hb_004918_020--Hb_000002_020 Hb_004918_020--Hb_156212_010 Hb_004918_020--Hb_000340_170 Hb_000002_020--Hb_156212_010 Hb_000002_020--Hb_000340_170 Hb_156212_010--Hb_000340_170 Hb_131748_010 Hb_131748_010 Hb_156212_010--Hb_131748_010 Hb_000340_170--Hb_131748_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.050353 0.251445 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis