Hb_120917_010

Information

Type -
Description -
Location Contig120917: 7-669
Sequence    

Annotation

kegg
ID rcu:RCOM_1598420
description Receptor protein kinase CLAVATA1 precursor, putative (EC:2.7.11.25 1.3.1.74)
nr
ID XP_012073772.1
description PREDICTED: receptor protein kinase CLAVATA1 [Jatropha curcas]
swissprot
ID Q9SYQ8
description Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3
trembl
ID A0A067KPG5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08194 PE=4 SV=1
Gene Ontology
ID GO:0005622
description receptor protein kinase clavata1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06437: 184-503
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_120917_010 0.0 - - PREDICTED: receptor protein kinase CLAVATA1 [Jatropha curcas]
2 Hb_000336_170 0.110182118 - - Polcalcin Jun o, putative [Ricinus communis]
3 Hb_093204_010 0.1126212138 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000333_150 0.1138153734 - - hypothetical protein RCOM_0711500 [Ricinus communis]
5 Hb_008978_010 0.1144574897 - - transmembrane receptor, putative [Ricinus communis]
6 Hb_000261_540 0.1155974152 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Jatropha curcas]
7 Hb_004994_070 0.1225472608 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
8 Hb_004767_040 0.1278056153 - - Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis]
9 Hb_013057_010 0.1288804806 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 43-like [Jatropha curcas]
10 Hb_163950_060 0.1299844428 - - multidrug resistance pump, putative [Ricinus communis]
11 Hb_006519_010 0.1301634125 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At4g27220 [Vitis vinifera]
12 Hb_000959_290 0.1305312962 - - PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas]
13 Hb_007943_040 0.1315610081 - - hypothetical protein JCGZ_07271 [Jatropha curcas]
14 Hb_011111_010 0.133737615 - - PREDICTED: putative RING-H2 finger protein ATL21A [Jatropha curcas]
15 Hb_009897_030 0.1379955148 - - -
16 Hb_011980_020 0.1383271255 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_011671_290 0.1477505319 transcription factor TF Family: ERF hypothetical protein JCGZ_26299 [Jatropha curcas]
18 Hb_005687_020 0.150829476 - - P66 protein [Hevea brasiliensis]
19 Hb_002572_060 0.1521725212 - - conserved hypothetical protein [Ricinus communis]
20 Hb_186671_020 0.1537811508 - - ankyrin repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_120917_010 Hb_120917_010 Hb_000336_170 Hb_000336_170 Hb_120917_010--Hb_000336_170 Hb_093204_010 Hb_093204_010 Hb_120917_010--Hb_093204_010 Hb_000333_150 Hb_000333_150 Hb_120917_010--Hb_000333_150 Hb_008978_010 Hb_008978_010 Hb_120917_010--Hb_008978_010 Hb_000261_540 Hb_000261_540 Hb_120917_010--Hb_000261_540 Hb_004994_070 Hb_004994_070 Hb_120917_010--Hb_004994_070 Hb_000336_170--Hb_000261_540 Hb_163950_060 Hb_163950_060 Hb_000336_170--Hb_163950_060 Hb_007943_040 Hb_007943_040 Hb_000336_170--Hb_007943_040 Hb_000336_170--Hb_008978_010 Hb_011980_020 Hb_011980_020 Hb_000336_170--Hb_011980_020 Hb_009897_030 Hb_009897_030 Hb_000336_170--Hb_009897_030 Hb_011111_010 Hb_011111_010 Hb_093204_010--Hb_011111_010 Hb_093204_010--Hb_004994_070 Hb_000959_290 Hb_000959_290 Hb_093204_010--Hb_000959_290 Hb_006519_010 Hb_006519_010 Hb_093204_010--Hb_006519_010 Hb_004767_040 Hb_004767_040 Hb_093204_010--Hb_004767_040 Hb_002572_060 Hb_002572_060 Hb_093204_010--Hb_002572_060 Hb_000333_150--Hb_008978_010 Hb_000333_150--Hb_004994_070 Hb_000333_150--Hb_000959_290 Hb_044026_010 Hb_044026_010 Hb_000333_150--Hb_044026_010 Hb_078477_010 Hb_078477_010 Hb_000333_150--Hb_078477_010 Hb_000333_150--Hb_093204_010 Hb_008978_010--Hb_163950_060 Hb_186671_020 Hb_186671_020 Hb_008978_010--Hb_186671_020 Hb_008978_010--Hb_011980_020 Hb_008978_010--Hb_000261_540 Hb_000261_540--Hb_007943_040 Hb_000261_540--Hb_009897_030 Hb_000261_540--Hb_163950_060 Hb_000261_540--Hb_004767_040 Hb_004994_070--Hb_006519_010 Hb_004994_070--Hb_000959_290 Hb_004994_070--Hb_011111_010 Hb_004994_070--Hb_002572_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 5.16371 0.0876089 0.219173 0 0.102932
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis