Hb_093084_030

Information

Type -
Description -
Location Contig93084: 20312-20782
Sequence    

Annotation

kegg
ID pop:POPTR_0015s09360g
description POPTRDRAFT_252246; hypothetical protein
nr
ID AFR46653.1
description oleosin2 [Plukenetia volubilis]
swissprot
ID Q9SS98
description Oleosin 5 OS=Arabidopsis thaliana GN=At3g01570 PE=2 SV=1
trembl
ID J9S4Z6
description Oleosin2 OS=Plukenetia volubilis GN=ole2 PE=2 SV=1
Gene Ontology
ID GO:0012511
description oleosin kda-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_093084_030 0.0 - - oleosin2 [Plukenetia volubilis]
2 Hb_004218_270 0.0185992695 - - hypothetical protein CICLE_v100134152mg, partial [Citrus clementina]
3 Hb_162450_010 0.048347618 - - PREDICTED: glucan endo-1,3-beta-glucosidase 12 [Jatropha curcas]
4 Hb_166360_010 0.0566052774 - - hypothetical protein POPTR_0010s12130g [Populus trichocarpa]
5 Hb_181908_010 0.0699743469 - - PREDICTED: UDP-glycosyltransferase 73C3 [Jatropha curcas]
6 Hb_185608_010 0.0728665922 - - hypothetical protein POPTR_0004s22210g [Populus trichocarpa]
7 Hb_005532_080 0.0737892969 - - PREDICTED: heparanase-like protein 2 [Jatropha curcas]
8 Hb_057862_010 0.0738924104 - - protein binding protein, putative [Ricinus communis]
9 Hb_001454_420 0.0739093179 - - multidrug resistance pump, putative [Ricinus communis]
10 Hb_000933_030 0.0782205753 transcription factor TF Family: ERF conserved hypothetical protein [Ricinus communis]
11 Hb_003858_010 0.0801529143 - - xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum]
12 Hb_011549_040 0.0816125315 - - -
13 Hb_005295_030 0.084236996 - - PREDICTED: uncharacterized protein LOC105645488 [Jatropha curcas]
14 Hb_007382_110 0.0872685577 - - PREDICTED: bidirectional sugar transporter N3 [Jatropha curcas]
15 Hb_008008_040 0.0873126424 - - PREDICTED: auxin-induced protein 15A-like [Jatropha curcas]
16 Hb_068804_190 0.0878330561 - - kinase, putative [Ricinus communis]
17 Hb_007113_060 0.0890746182 - - PREDICTED: rac-like GTP-binding protein RAC2 [Jatropha curcas]
18 Hb_011689_010 0.0915268919 - - PREDICTED: S-adenosylmethionine decarboxylase proenzyme 4 [Jatropha curcas]
19 Hb_006977_010 0.0944641766 - - unnamed protein product [Vitis vinifera]
20 Hb_004162_200 0.0979630517 - - PREDICTED: uncharacterized protein At1g08160 [Jatropha curcas]

Gene co-expression network

sample Hb_093084_030 Hb_093084_030 Hb_004218_270 Hb_004218_270 Hb_093084_030--Hb_004218_270 Hb_162450_010 Hb_162450_010 Hb_093084_030--Hb_162450_010 Hb_166360_010 Hb_166360_010 Hb_093084_030--Hb_166360_010 Hb_181908_010 Hb_181908_010 Hb_093084_030--Hb_181908_010 Hb_185608_010 Hb_185608_010 Hb_093084_030--Hb_185608_010 Hb_005532_080 Hb_005532_080 Hb_093084_030--Hb_005532_080 Hb_004218_270--Hb_162450_010 Hb_004218_270--Hb_166360_010 Hb_000933_030 Hb_000933_030 Hb_004218_270--Hb_000933_030 Hb_011549_040 Hb_011549_040 Hb_004218_270--Hb_011549_040 Hb_004218_270--Hb_005532_080 Hb_162450_010--Hb_166360_010 Hb_057862_010 Hb_057862_010 Hb_162450_010--Hb_057862_010 Hb_162450_010--Hb_185608_010 Hb_162450_010--Hb_005532_080 Hb_166360_010--Hb_005532_080 Hb_068804_190 Hb_068804_190 Hb_166360_010--Hb_068804_190 Hb_166360_010--Hb_011549_040 Hb_166360_010--Hb_000933_030 Hb_001454_420 Hb_001454_420 Hb_181908_010--Hb_001454_420 Hb_008008_040 Hb_008008_040 Hb_181908_010--Hb_008008_040 Hb_001373_170 Hb_001373_170 Hb_181908_010--Hb_001373_170 Hb_003858_010 Hb_003858_010 Hb_181908_010--Hb_003858_010 Hb_000445_410 Hb_000445_410 Hb_181908_010--Hb_000445_410 Hb_005653_050 Hb_005653_050 Hb_181908_010--Hb_005653_050 Hb_185608_010--Hb_057862_010 Hb_049955_010 Hb_049955_010 Hb_185608_010--Hb_049955_010 Hb_011344_040 Hb_011344_040 Hb_185608_010--Hb_011344_040 Hb_007382_110 Hb_007382_110 Hb_185608_010--Hb_007382_110 Hb_185608_010--Hb_003858_010 Hb_005532_080--Hb_068804_190 Hb_005532_080--Hb_011549_040 Hb_005532_080--Hb_007382_110 Hb_056506_040 Hb_056506_040 Hb_005532_080--Hb_056506_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.153284 0.561789 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.214773

CAGE analysis