Hb_074312_010

Information

Type -
Description -
Location Contig74312: 21070-23031
Sequence    

Annotation

kegg
ID tcc:TCM_033952
description Cytochrome P450
nr
ID XP_012072001.1
description PREDICTED: cytochrome P450 82A3-like [Jatropha curcas]
swissprot
ID O49858
description Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1
trembl
ID A0A067KTX7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04363 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56566: 21133-22871 , PASA_asmbl_56567: 22892-23048
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_074312_010 0.0 - - PREDICTED: cytochrome P450 82A3-like [Jatropha curcas]
2 Hb_005610_070 0.016110222 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
3 Hb_011382_010 0.0251053021 - - hypothetical protein CICLE_v10028106mg [Citrus clementina]
4 Hb_163566_020 0.0253589767 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic isoform X2 [Jatropha curcas]
5 Hb_007187_010 0.0278239833 - - hypothetical protein JCGZ_09061 [Jatropha curcas]
6 Hb_002014_150 0.0308431154 - - monooxygenase, putative [Ricinus communis]
7 Hb_010288_070 0.0326600419 transcription factor TF Family: MYB MYB-like DNA-binding domain protein [Theobroma cacao]
8 Hb_005280_020 0.0353469598 - - glycine cleavage system h protein, putative [Ricinus communis]
9 Hb_000010_160 0.0377158592 - - Uncharacterized protein TCM_014508 [Theobroma cacao]
10 Hb_002304_030 0.0390822944 - - hypothetical protein JCGZ_21517 [Jatropha curcas]
11 Hb_003032_080 0.040380377 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001205_220 0.041069627 - - conserved hypothetical protein [Ricinus communis]
13 Hb_009707_020 0.0429580586 - - PREDICTED: 3-ketoacyl-CoA synthase 12 [Jatropha curcas]
14 Hb_000512_120 0.0487876353 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription factor NGA1-like [Jatropha curcas]
15 Hb_005888_020 0.0501871033 - - PREDICTED: uncharacterized protein LOC105127729 [Populus euphratica]
16 Hb_014056_020 0.0534180256 - - zinc finger protein, putative [Ricinus communis]
17 Hb_002965_170 0.0576322038 transcription factor TF Family: MYB PREDICTED: myb-related protein P [Jatropha curcas]
18 Hb_000297_190 0.0582366108 - - cell wall invertase [Manihot esculenta]
19 Hb_001519_140 0.0583917017 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Vitis vinifera]
20 Hb_000844_080 0.0604269229 transcription factor TF Family: G2-like hypothetical protein RCOM_1592640 [Ricinus communis]

Gene co-expression network

sample Hb_074312_010 Hb_074312_010 Hb_005610_070 Hb_005610_070 Hb_074312_010--Hb_005610_070 Hb_011382_010 Hb_011382_010 Hb_074312_010--Hb_011382_010 Hb_163566_020 Hb_163566_020 Hb_074312_010--Hb_163566_020 Hb_007187_010 Hb_007187_010 Hb_074312_010--Hb_007187_010 Hb_002014_150 Hb_002014_150 Hb_074312_010--Hb_002014_150 Hb_010288_070 Hb_010288_070 Hb_074312_010--Hb_010288_070 Hb_005610_070--Hb_010288_070 Hb_005610_070--Hb_011382_010 Hb_005610_070--Hb_002014_150 Hb_002304_030 Hb_002304_030 Hb_005610_070--Hb_002304_030 Hb_005610_070--Hb_163566_020 Hb_000010_160 Hb_000010_160 Hb_011382_010--Hb_000010_160 Hb_011382_010--Hb_007187_010 Hb_009707_020 Hb_009707_020 Hb_011382_010--Hb_009707_020 Hb_001205_220 Hb_001205_220 Hb_011382_010--Hb_001205_220 Hb_163566_020--Hb_002014_150 Hb_003032_080 Hb_003032_080 Hb_163566_020--Hb_003032_080 Hb_163566_020--Hb_011382_010 Hb_163566_020--Hb_007187_010 Hb_007187_010--Hb_009707_020 Hb_007187_010--Hb_000010_160 Hb_007187_010--Hb_001205_220 Hb_000512_120 Hb_000512_120 Hb_007187_010--Hb_000512_120 Hb_002014_150--Hb_003032_080 Hb_002014_150--Hb_011382_010 Hb_002014_150--Hb_010288_070 Hb_010288_070--Hb_002304_030 Hb_005888_020 Hb_005888_020 Hb_010288_070--Hb_005888_020 Hb_010288_070--Hb_003032_080 Hb_003050_380 Hb_003050_380 Hb_010288_070--Hb_003050_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0380554 32.7432 12.4904 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 42.9562

CAGE analysis