Hb_055277_010

Information

Type -
Description -
Location Contig55277: 7725-8853
Sequence    

Annotation

kegg
ID rcu:RCOM_1590300
description Protein COQ10 B, mitochondrial precursor, putative
nr
ID XP_012071659.1
description PREDICTED: coenzyme Q-binding protein COQ10 homolog, mitochondrial [Jatropha curcas]
swissprot
ID Q6PBN4
description Coenzyme Q-binding protein COQ10 homolog, mitochondrial OS=Danio rerio GN=zgc:73324 PE=2 SV=2
trembl
ID A0A067L2L2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04259 PE=4 SV=1
Gene Ontology
ID GO:0031668
description coenzyme q-binding protein coq10 mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_055277_010 0.0 - - PREDICTED: coenzyme Q-binding protein COQ10 homolog, mitochondrial [Jatropha curcas]
2 Hb_002849_010 0.1338687354 - - PREDICTED: putative UPF0481 protein At3g02645 [Jatropha curcas]
3 Hb_136973_020 0.1345816164 - - -
4 Hb_005928_010 0.1349081667 - - PREDICTED: phospholipase A1-Igamma1, chloroplastic-like [Jatropha curcas]
5 Hb_108670_010 0.137115405 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Jatropha curcas]
6 Hb_064885_010 0.1385033017 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
7 Hb_000628_050 0.1410097388 - - nucleic acid binding protein, putative [Ricinus communis]
8 Hb_001002_020 0.1422660265 - - ATP binding protein, putative [Ricinus communis]
9 Hb_000248_080 0.142869181 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
10 Hb_000277_030 0.146994635 desease resistance Gene Name: NB-ARC hypothetical protein POPTR_0004s20690g [Populus trichocarpa]
11 Hb_173029_010 0.1471560667 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_054165_010 0.1490446445 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
13 Hb_116103_010 0.1521108651 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 5-like [Jatropha curcas]
14 Hb_009083_020 0.1527779359 - - PREDICTED: thaumatin-like protein 1b [Jatropha curcas]
15 Hb_172983_010 0.1541385243 - - conserved hypothetical protein [Ricinus communis]
16 Hb_160950_010 0.1541753447 - - PREDICTED: uncharacterized protein LOC105761043 [Gossypium raimondii]
17 Hb_005170_020 0.1554861305 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
18 Hb_005773_010 0.1632581006 - - -
19 Hb_004241_190 0.1645184153 - - -
20 Hb_137862_020 0.1663208296 - - Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_055277_010 Hb_055277_010 Hb_002849_010 Hb_002849_010 Hb_055277_010--Hb_002849_010 Hb_136973_020 Hb_136973_020 Hb_055277_010--Hb_136973_020 Hb_005928_010 Hb_005928_010 Hb_055277_010--Hb_005928_010 Hb_108670_010 Hb_108670_010 Hb_055277_010--Hb_108670_010 Hb_064885_010 Hb_064885_010 Hb_055277_010--Hb_064885_010 Hb_000628_050 Hb_000628_050 Hb_055277_010--Hb_000628_050 Hb_116103_010 Hb_116103_010 Hb_002849_010--Hb_116103_010 Hb_004314_020 Hb_004314_020 Hb_002849_010--Hb_004314_020 Hb_011028_040 Hb_011028_040 Hb_002849_010--Hb_011028_040 Hb_000904_110 Hb_000904_110 Hb_002849_010--Hb_000904_110 Hb_002849_010--Hb_064885_010 Hb_002849_010--Hb_000628_050 Hb_000248_080 Hb_000248_080 Hb_136973_020--Hb_000248_080 Hb_136973_020--Hb_005928_010 Hb_000277_030 Hb_000277_030 Hb_136973_020--Hb_000277_030 Hb_001002_020 Hb_001002_020 Hb_136973_020--Hb_001002_020 Hb_054165_010 Hb_054165_010 Hb_136973_020--Hb_054165_010 Hb_137862_020 Hb_137862_020 Hb_136973_020--Hb_137862_020 Hb_005928_010--Hb_001002_020 Hb_005928_010--Hb_000277_030 Hb_005928_010--Hb_054165_010 Hb_005928_010--Hb_000248_080 Hb_003847_090 Hb_003847_090 Hb_005928_010--Hb_003847_090 Hb_005773_010 Hb_005773_010 Hb_108670_010--Hb_005773_010 Hb_000072_010 Hb_000072_010 Hb_108670_010--Hb_000072_010 Hb_104855_010 Hb_104855_010 Hb_108670_010--Hb_104855_010 Hb_108670_010--Hb_000628_050 Hb_005170_020 Hb_005170_020 Hb_108670_010--Hb_005170_020 Hb_064885_010--Hb_116103_010 Hb_064885_010--Hb_001002_020 Hb_064885_010--Hb_005928_010 Hb_064885_010--Hb_000904_110 Hb_064885_010--Hb_054165_010 Hb_064885_010--Hb_000277_030 Hb_004241_190 Hb_004241_190 Hb_000628_050--Hb_004241_190 Hb_173029_010 Hb_173029_010 Hb_000628_050--Hb_173029_010 Hb_000628_050--Hb_005773_010 Hb_000061_060 Hb_000061_060 Hb_000628_050--Hb_000061_060 Hb_000668_220 Hb_000668_220 Hb_000628_050--Hb_000668_220 Hb_053935_010 Hb_053935_010 Hb_000628_050--Hb_053935_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.74818 2.31986 2.34733 0.0464773 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.168743 0 0 0

CAGE analysis