Hb_050454_010

Information

Type -
Description -
Location Contig50454: 169-3469
Sequence    

Annotation

kegg
ID pmum:103321527
description uncharacterized LOC103321527
nr
ID XP_012067713.1
description PREDICTED: uncharacterized protein LOC105630497 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L9U5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15657 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_050454_010 0.0 - - PREDICTED: uncharacterized protein LOC105630497 [Jatropha curcas]
2 Hb_044736_010 0.0623485169 - - ubiquitin-protein ligase, putative [Ricinus communis]
3 Hb_000483_220 0.0860262577 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL2-like [Jatropha curcas]
4 Hb_001766_080 0.0975716734 - - PREDICTED: uncharacterized protein LOC105644125 [Jatropha curcas]
5 Hb_001377_270 0.0979187 - - hypothetical protein CICLE_v10021159mg [Citrus clementina]
6 Hb_001018_110 0.098801997 - - unnamed protein product [Coffea canephora]
7 Hb_005269_040 0.0994821298 - - PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g06270 [Jatropha curcas]
8 Hb_000933_060 0.0998548408 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000665_060 0.1018569111 - - PREDICTED: trafficking protein particle complex II-specific subunit 120 homolog [Jatropha curcas]
10 Hb_012322_010 0.1039484353 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
11 Hb_030827_070 0.1049537007 - - PREDICTED: transmembrane protein 161B [Jatropha curcas]
12 Hb_000192_080 0.1054187708 - - PREDICTED: serine/threonine-protein kinase SAPK3 isoform X1 [Jatropha curcas]
13 Hb_000890_210 0.1077327508 - - PREDICTED: serine/threonine-protein kinase PBS1 isoform X1 [Eucalyptus grandis]
14 Hb_001018_130 0.1088832117 - - PREDICTED: uncharacterized protein LOC105638260 [Jatropha curcas]
15 Hb_001163_100 0.1089432204 - - serine/threonine protein kinase, putative [Ricinus communis]
16 Hb_155159_020 0.1094651394 - - PREDICTED: clathrin light chain 1-like [Jatropha curcas]
17 Hb_003994_280 0.1114052155 - - PREDICTED: uncharacterized membrane protein At1g16860-like [Jatropha curcas]
18 Hb_000318_290 0.1118700176 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription factor VRN1 isoform X1 [Jatropha curcas]
19 Hb_000482_020 0.1120167217 - - cell wall invertase [Manihot esculenta]
20 Hb_001268_110 0.1123982403 - - PREDICTED: uncharacterized protein LOC105630183 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_050454_010 Hb_050454_010 Hb_044736_010 Hb_044736_010 Hb_050454_010--Hb_044736_010 Hb_000483_220 Hb_000483_220 Hb_050454_010--Hb_000483_220 Hb_001766_080 Hb_001766_080 Hb_050454_010--Hb_001766_080 Hb_001377_270 Hb_001377_270 Hb_050454_010--Hb_001377_270 Hb_001018_110 Hb_001018_110 Hb_050454_010--Hb_001018_110 Hb_005269_040 Hb_005269_040 Hb_050454_010--Hb_005269_040 Hb_002445_120 Hb_002445_120 Hb_044736_010--Hb_002445_120 Hb_044736_010--Hb_001018_110 Hb_022833_100 Hb_022833_100 Hb_044736_010--Hb_022833_100 Hb_001018_130 Hb_001018_130 Hb_044736_010--Hb_001018_130 Hb_012322_010 Hb_012322_010 Hb_044736_010--Hb_012322_010 Hb_000665_060 Hb_000665_060 Hb_000483_220--Hb_000665_060 Hb_007416_090 Hb_007416_090 Hb_000483_220--Hb_007416_090 Hb_004607_050 Hb_004607_050 Hb_000483_220--Hb_004607_050 Hb_000260_010 Hb_000260_010 Hb_000483_220--Hb_000260_010 Hb_001163_100 Hb_001163_100 Hb_000483_220--Hb_001163_100 Hb_005051_020 Hb_005051_020 Hb_001766_080--Hb_005051_020 Hb_003617_020 Hb_003617_020 Hb_001766_080--Hb_003617_020 Hb_004672_040 Hb_004672_040 Hb_001766_080--Hb_004672_040 Hb_000072_120 Hb_000072_120 Hb_001766_080--Hb_000072_120 Hb_001766_080--Hb_005269_040 Hb_000009_560 Hb_000009_560 Hb_001766_080--Hb_000009_560 Hb_000080_150 Hb_000080_150 Hb_001377_270--Hb_000080_150 Hb_001377_270--Hb_005269_040 Hb_001538_130 Hb_001538_130 Hb_001377_270--Hb_001538_130 Hb_000347_180 Hb_000347_180 Hb_001377_270--Hb_000347_180 Hb_000608_320 Hb_000608_320 Hb_001377_270--Hb_000608_320 Hb_000366_120 Hb_000366_120 Hb_001377_270--Hb_000366_120 Hb_000300_630 Hb_000300_630 Hb_001018_110--Hb_000300_630 Hb_005023_010 Hb_005023_010 Hb_001018_110--Hb_005023_010 Hb_001018_110--Hb_001018_130 Hb_003994_280 Hb_003994_280 Hb_001018_110--Hb_003994_280 Hb_072922_010 Hb_072922_010 Hb_001018_110--Hb_072922_010 Hb_144528_010 Hb_144528_010 Hb_005269_040--Hb_144528_010 Hb_005269_040--Hb_001538_130 Hb_002662_020 Hb_002662_020 Hb_005269_040--Hb_002662_020 Hb_000192_080 Hb_000192_080 Hb_005269_040--Hb_000192_080 Hb_074715_010 Hb_074715_010 Hb_005269_040--Hb_074715_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
33.3334 24.0129 8.53466 58.3139 25.3592 42.6467
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
27.9469 25.1248 48.4235 31.8128 22.4928

CAGE analysis