Hb_041362_010

Information

Type transcription factor
Description TF Family: Tify
Location Contig41362: 126-2778
Sequence    

Annotation

kegg
ID rcu:RCOM_0631620
description hypothetical protein
nr
ID AIY25009.1
description JAZ8 [Hevea brasiliensis]
swissprot
ID Q8LBM2
description Protein TIFY 5A OS=Arabidopsis thaliana GN=TIFY5A PE=1 SV=1
trembl
ID A0A0B4RUY2
description JAZ8 OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_041362_010 0.0 transcription factor TF Family: Tify JAZ8 [Hevea brasiliensis]
2 Hb_012136_010 0.1227371097 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
3 Hb_005066_060 0.1227406309 - - FAD-binding Berberine family protein, putative [Theobroma cacao]
4 Hb_006533_010 0.1242156319 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
5 Hb_005563_020 0.1267791809 transcription factor TF Family: Orphans hypothetical protein POPTR_0004s16810g, partial [Populus trichocarpa]
6 Hb_119748_010 0.1284156085 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
7 Hb_003141_020 0.1284448775 - - PREDICTED: chlorophyllase-1-like [Jatropha curcas]
8 Hb_123560_010 0.1339905483 - - hypothetical protein JCGZ_12463 [Jatropha curcas]
9 Hb_019708_010 0.1348071879 - - -
10 Hb_038135_010 0.1365127266 transcription factor TF Family: C2H2 Transcriptional regulator SUPERMAN, putative [Ricinus communis]
11 Hb_078903_010 0.1420847674 - - Osmotin precursor, putative [Ricinus communis]
12 Hb_000560_050 0.1423865859 - - hypothetical protein JCGZ_05738 [Jatropha curcas]
13 Hb_001652_060 0.1529442902 - - PREDICTED: uncharacterized protein LOC103404034 [Malus domestica]
14 Hb_014749_010 0.1658573614 - - hypothetical protein JCGZ_26951 [Jatropha curcas]
15 Hb_007320_050 0.1709577016 - - PREDICTED: uncharacterized protein LOC105637288 [Jatropha curcas]
16 Hb_002184_040 0.1716726961 transcription factor TF Family: bHLH transcription factor, putative [Ricinus communis]
17 Hb_001142_040 0.1726914127 - - PREDICTED: protein YLS9 [Jatropha curcas]
18 Hb_004162_310 0.1753507494 - - tonoplast intrinsic protein, putative [Ricinus communis]
19 Hb_003857_010 0.1772100683 - - conserved hypothetical protein [Ricinus communis]
20 Hb_008775_050 0.1793265838 - - PREDICTED: probable glutathione S-transferase parC [Jatropha curcas]

Gene co-expression network

sample Hb_041362_010 Hb_041362_010 Hb_012136_010 Hb_012136_010 Hb_041362_010--Hb_012136_010 Hb_005066_060 Hb_005066_060 Hb_041362_010--Hb_005066_060 Hb_006533_010 Hb_006533_010 Hb_041362_010--Hb_006533_010 Hb_005563_020 Hb_005563_020 Hb_041362_010--Hb_005563_020 Hb_119748_010 Hb_119748_010 Hb_041362_010--Hb_119748_010 Hb_003141_020 Hb_003141_020 Hb_041362_010--Hb_003141_020 Hb_012136_010--Hb_005066_060 Hb_012136_010--Hb_006533_010 Hb_012136_010--Hb_005563_020 Hb_012136_010--Hb_119748_010 Hb_123560_010 Hb_123560_010 Hb_012136_010--Hb_123560_010 Hb_019708_010 Hb_019708_010 Hb_012136_010--Hb_019708_010 Hb_005066_060--Hb_006533_010 Hb_005066_060--Hb_005563_020 Hb_005066_060--Hb_119748_010 Hb_005066_060--Hb_019708_010 Hb_005066_060--Hb_123560_010 Hb_006533_010--Hb_119748_010 Hb_006533_010--Hb_019708_010 Hb_038135_010 Hb_038135_010 Hb_006533_010--Hb_038135_010 Hb_006533_010--Hb_005563_020 Hb_005563_020--Hb_123560_010 Hb_078903_010 Hb_078903_010 Hb_005563_020--Hb_078903_010 Hb_001652_060 Hb_001652_060 Hb_005563_020--Hb_001652_060 Hb_119748_010--Hb_019708_010 Hb_119748_010--Hb_038135_010 Hb_000560_050 Hb_000560_050 Hb_119748_010--Hb_000560_050 Hb_000069_050 Hb_000069_050 Hb_003141_020--Hb_000069_050 Hb_000836_400 Hb_000836_400 Hb_003141_020--Hb_000836_400 Hb_015146_010 Hb_015146_010 Hb_003141_020--Hb_015146_010 Hb_003141_020--Hb_078903_010 Hb_003141_020--Hb_001652_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.350454 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0738696 0 2.05428 0

CAGE analysis