Hb_030469_010

Information

Type -
Description -
Location Contig30469: 10128-12697
Sequence    

Annotation

kegg
ID rcu:RCOM_1096970
description S-locus-specific glycoprotein S6 precursor, putative (EC:2.7.10.2)
nr
ID XP_012091449.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
swissprot
ID O64783
description G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 OS=Arabidopsis thaliana GN=At1g61370 PE=3 SV=2
trembl
ID A0A067JDL7
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_21324 PE=3 SV=1
Gene Ontology
ID GO:0004674
description s-locus-specific glycoprotein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_030469_010 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
2 Hb_000172_730 0.0272137322 - - PREDICTED: cytochrome P450 CYP736A12-like [Nicotiana sylvestris]
3 Hb_110562_020 0.0431037775 - - hypothetical protein JCGZ_12857 [Jatropha curcas]
4 Hb_000002_130 0.0723973629 - - PREDICTED: early nodulin-75-like [Jatropha curcas]
5 Hb_110048_010 0.1022694249 - - PREDICTED: uncharacterized protein LOC104887199 [Beta vulgaris subsp. vulgaris]
6 Hb_001511_130 0.1046238652 - - PREDICTED: taxadien-5-alpha-ol O-acetyltransferase [Jatropha curcas]
7 Hb_008978_010 0.1093053443 - - transmembrane receptor, putative [Ricinus communis]
8 Hb_000926_170 0.1145333776 - - conserved hypothetical protein [Ricinus communis]
9 Hb_007040_030 0.1209165699 - - PREDICTED: uncharacterized protein LOC103415345 [Malus domestica]
10 Hb_000896_140 0.1215117523 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2 [Jatropha curcas]
11 Hb_000333_150 0.1304736155 - - hypothetical protein RCOM_0711500 [Ricinus communis]
12 Hb_000004_150 0.1327663824 - - hypothetical protein RCOM_1382630 [Ricinus communis]
13 Hb_000007_170 0.1327663824 - - PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein [Nelumbo nucifera]
14 Hb_000010_280 0.1327663824 - - hypothetical protein JCGZ_13805 [Jatropha curcas]
15 Hb_000022_220 0.1327663824 - - PREDICTED: potassium channel KAT3 [Jatropha curcas]
16 Hb_000045_120 0.1327663824 - - hypothetical protein JCGZ_01307 [Jatropha curcas]
17 Hb_000056_320 0.1327663824 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
18 Hb_000066_110 0.1327663824 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01370 [Jatropha curcas]
19 Hb_000072_270 0.1327663824 - - JHL22C18.10 [Jatropha curcas]
20 Hb_000078_110 0.1327663824 - - PREDICTED: uncharacterized protein LOC105640496 [Jatropha curcas]

Gene co-expression network

sample Hb_030469_010 Hb_030469_010 Hb_000172_730 Hb_000172_730 Hb_030469_010--Hb_000172_730 Hb_110562_020 Hb_110562_020 Hb_030469_010--Hb_110562_020 Hb_000002_130 Hb_000002_130 Hb_030469_010--Hb_000002_130 Hb_110048_010 Hb_110048_010 Hb_030469_010--Hb_110048_010 Hb_001511_130 Hb_001511_130 Hb_030469_010--Hb_001511_130 Hb_008978_010 Hb_008978_010 Hb_030469_010--Hb_008978_010 Hb_000172_730--Hb_110562_020 Hb_000172_730--Hb_000002_130 Hb_000172_730--Hb_110048_010 Hb_000926_170 Hb_000926_170 Hb_000172_730--Hb_000926_170 Hb_007040_030 Hb_007040_030 Hb_000172_730--Hb_007040_030 Hb_110562_020--Hb_000002_130 Hb_110562_020--Hb_000926_170 Hb_110562_020--Hb_007040_030 Hb_000896_140 Hb_000896_140 Hb_110562_020--Hb_000896_140 Hb_000002_130--Hb_000926_170 Hb_000002_130--Hb_007040_030 Hb_000002_130--Hb_000896_140 Hb_119789_010 Hb_119789_010 Hb_000002_130--Hb_119789_010 Hb_111908_010 Hb_111908_010 Hb_110048_010--Hb_111908_010 Hb_110048_010--Hb_000002_130 Hb_110048_010--Hb_110562_020 Hb_044026_010 Hb_044026_010 Hb_110048_010--Hb_044026_010 Hb_110048_010--Hb_000926_170 Hb_030312_060 Hb_030312_060 Hb_001511_130--Hb_030312_060 Hb_000699_200 Hb_000699_200 Hb_001511_130--Hb_000699_200 Hb_000473_010 Hb_000473_010 Hb_001511_130--Hb_000473_010 Hb_007264_050 Hb_007264_050 Hb_001511_130--Hb_007264_050 Hb_001511_130--Hb_000172_730 Hb_163950_060 Hb_163950_060 Hb_008978_010--Hb_163950_060 Hb_000333_150 Hb_000333_150 Hb_008978_010--Hb_000333_150 Hb_000336_170 Hb_000336_170 Hb_008978_010--Hb_000336_170 Hb_186671_020 Hb_186671_020 Hb_008978_010--Hb_186671_020 Hb_011980_020 Hb_011980_020 Hb_008978_010--Hb_011980_020 Hb_000261_540 Hb_000261_540 Hb_008978_010--Hb_000261_540
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.13894 0.0410752 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis