Hb_000002_130

Information

Type -
Description -
Location Contig2: 260107-261491
Sequence    

Annotation

kegg
ID tcc:TCM_020877
description hypothetical protein
nr
ID XP_012069943.1
description PREDICTED: early nodulin-75-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KZD7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02321 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000002_130 0.0 - - PREDICTED: early nodulin-75-like [Jatropha curcas]
2 Hb_110562_020 0.0295767441 - - hypothetical protein JCGZ_12857 [Jatropha curcas]
3 Hb_000926_170 0.0429939409 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000172_730 0.0454744231 - - PREDICTED: cytochrome P450 CYP736A12-like [Nicotiana sylvestris]
5 Hb_007040_030 0.0495413817 - - PREDICTED: uncharacterized protein LOC103415345 [Malus domestica]
6 Hb_000896_140 0.0501522533 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2 [Jatropha curcas]
7 Hb_119789_010 0.0716941409 - - PREDICTED: uncharacterized protein LOC105134438 [Populus euphratica]
8 Hb_030469_010 0.0723973629 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
9 Hb_110048_010 0.0777497063 - - PREDICTED: uncharacterized protein LOC104887199 [Beta vulgaris subsp. vulgaris]
10 Hb_156055_020 0.080518352 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004899_160 0.088190216 - - -
12 Hb_021409_060 0.108871835 - - PREDICTED: aluminum-activated malate transporter 10-like [Jatropha curcas]
13 Hb_168436_010 0.1135251631 - - PREDICTED: probable receptor-like protein kinase At1g67000-like [Citrus sinensis]
14 Hb_002127_010 0.1219352902 - - Aluminum activated malate transporter family protein, putative [Theobroma cacao]
15 Hb_111908_010 0.1307915422 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_001268_360 0.1309267371 - - PREDICTED: uncharacterized protein LOC104447679 [Eucalyptus grandis]
17 Hb_044026_010 0.1315086786 - - PREDICTED: cytochrome P450 93A3-like [Jatropha curcas]
18 Hb_000473_010 0.1345627777 - - PREDICTED: galactolipase DONGLE, chloroplastic [Jatropha curcas]
19 Hb_001511_130 0.1376301355 - - PREDICTED: taxadien-5-alpha-ol O-acetyltransferase [Jatropha curcas]
20 Hb_005843_070 0.1378068273 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]

Gene co-expression network

sample Hb_000002_130 Hb_000002_130 Hb_110562_020 Hb_110562_020 Hb_000002_130--Hb_110562_020 Hb_000926_170 Hb_000926_170 Hb_000002_130--Hb_000926_170 Hb_000172_730 Hb_000172_730 Hb_000002_130--Hb_000172_730 Hb_007040_030 Hb_007040_030 Hb_000002_130--Hb_007040_030 Hb_000896_140 Hb_000896_140 Hb_000002_130--Hb_000896_140 Hb_119789_010 Hb_119789_010 Hb_000002_130--Hb_119789_010 Hb_110562_020--Hb_000172_730 Hb_030469_010 Hb_030469_010 Hb_110562_020--Hb_030469_010 Hb_110562_020--Hb_000926_170 Hb_110562_020--Hb_007040_030 Hb_110562_020--Hb_000896_140 Hb_000926_170--Hb_007040_030 Hb_000926_170--Hb_000896_140 Hb_000926_170--Hb_119789_010 Hb_156055_020 Hb_156055_020 Hb_000926_170--Hb_156055_020 Hb_004899_160 Hb_004899_160 Hb_000926_170--Hb_004899_160 Hb_000172_730--Hb_030469_010 Hb_110048_010 Hb_110048_010 Hb_000172_730--Hb_110048_010 Hb_000172_730--Hb_000926_170 Hb_000172_730--Hb_007040_030 Hb_007040_030--Hb_000896_140 Hb_007040_030--Hb_119789_010 Hb_007040_030--Hb_156055_020 Hb_007040_030--Hb_004899_160 Hb_000896_140--Hb_119789_010 Hb_000896_140--Hb_156055_020 Hb_000896_140--Hb_004899_160 Hb_119789_010--Hb_156055_020 Hb_119789_010--Hb_004899_160 Hb_021409_060 Hb_021409_060 Hb_119789_010--Hb_021409_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.229987 0.0180839 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis