Hb_110048_010

Information

Type -
Description -
Location Contig110048: 178-1238
Sequence    

Annotation

kegg
ID bvg:104887199
description uncharacterized LOC104887199
nr
ID XP_010670097.1
description PREDICTED: uncharacterized protein LOC104887199 [Beta vulgaris subsp. vulgaris]
swissprot
ID -
description -
trembl
ID F4NCJ0
description Uncharacterized protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1
Gene Ontology
ID GO:0003676
description PREDICTED: uncharacterized protein LOC104887199

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_110048_010 0.0 - - PREDICTED: uncharacterized protein LOC104887199 [Beta vulgaris subsp. vulgaris]
2 Hb_111908_010 0.071419797 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_000002_130 0.0777497063 - - PREDICTED: early nodulin-75-like [Jatropha curcas]
4 Hb_110562_020 0.0811460237 - - hypothetical protein JCGZ_12857 [Jatropha curcas]
5 Hb_044026_010 0.0837153775 - - PREDICTED: cytochrome P450 93A3-like [Jatropha curcas]
6 Hb_000172_730 0.0871497989 - - PREDICTED: cytochrome P450 CYP736A12-like [Nicotiana sylvestris]
7 Hb_000926_170 0.0914311202 - - conserved hypothetical protein [Ricinus communis]
8 Hb_007040_030 0.095045484 - - PREDICTED: uncharacterized protein LOC103415345 [Malus domestica]
9 Hb_000896_140 0.0953984116 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2 [Jatropha curcas]
10 Hb_005843_070 0.0965072837 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
11 Hb_004117_360 0.0965246958 - - hypothetical protein JCGZ_00367 [Jatropha curcas]
12 Hb_001514_110 0.101175789 - - conserved hypothetical protein [Ricinus communis]
13 Hb_005725_180 0.1017720159 - - -
14 Hb_030469_010 0.1022694249 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
15 Hb_000333_150 0.1084692571 - - hypothetical protein RCOM_0711500 [Ricinus communis]
16 Hb_119789_010 0.1092856661 - - PREDICTED: uncharacterized protein LOC105134438 [Populus euphratica]
17 Hb_005946_190 0.1109938461 - - hypothetical protein EUGRSUZ_C01051 [Eucalyptus grandis]
18 Hb_004157_080 0.1131646381 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT12 [Jatropha curcas]
19 Hb_156055_020 0.1156408661 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001405_260 0.1179112919 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]

Gene co-expression network

sample Hb_110048_010 Hb_110048_010 Hb_111908_010 Hb_111908_010 Hb_110048_010--Hb_111908_010 Hb_000002_130 Hb_000002_130 Hb_110048_010--Hb_000002_130 Hb_110562_020 Hb_110562_020 Hb_110048_010--Hb_110562_020 Hb_044026_010 Hb_044026_010 Hb_110048_010--Hb_044026_010 Hb_000172_730 Hb_000172_730 Hb_110048_010--Hb_000172_730 Hb_000926_170 Hb_000926_170 Hb_110048_010--Hb_000926_170 Hb_004117_360 Hb_004117_360 Hb_111908_010--Hb_004117_360 Hb_001514_110 Hb_001514_110 Hb_111908_010--Hb_001514_110 Hb_005725_180 Hb_005725_180 Hb_111908_010--Hb_005725_180 Hb_012691_040 Hb_012691_040 Hb_111908_010--Hb_012691_040 Hb_005843_070 Hb_005843_070 Hb_111908_010--Hb_005843_070 Hb_000002_130--Hb_110562_020 Hb_000002_130--Hb_000926_170 Hb_000002_130--Hb_000172_730 Hb_007040_030 Hb_007040_030 Hb_000002_130--Hb_007040_030 Hb_000896_140 Hb_000896_140 Hb_000002_130--Hb_000896_140 Hb_119789_010 Hb_119789_010 Hb_000002_130--Hb_119789_010 Hb_110562_020--Hb_000172_730 Hb_030469_010 Hb_030469_010 Hb_110562_020--Hb_030469_010 Hb_110562_020--Hb_000926_170 Hb_110562_020--Hb_007040_030 Hb_110562_020--Hb_000896_140 Hb_001405_260 Hb_001405_260 Hb_044026_010--Hb_001405_260 Hb_000333_150 Hb_000333_150 Hb_044026_010--Hb_000333_150 Hb_004157_080 Hb_004157_080 Hb_044026_010--Hb_004157_080 Hb_005648_030 Hb_005648_030 Hb_044026_010--Hb_005648_030 Hb_044026_010--Hb_111908_010 Hb_000172_730--Hb_030469_010 Hb_000172_730--Hb_000926_170 Hb_000172_730--Hb_007040_030 Hb_000926_170--Hb_007040_030 Hb_000926_170--Hb_000896_140 Hb_000926_170--Hb_119789_010 Hb_156055_020 Hb_156055_020 Hb_000926_170--Hb_156055_020 Hb_004899_160 Hb_004899_160 Hb_000926_170--Hb_004899_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.24285 0.167508 0.0292144 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis