Hb_030312_060

Information

Type -
Description -
Location Contig30312: 34255-36176
Sequence    

Annotation

kegg
ID rcu:RCOM_0774350
description hypothetical protein
nr
ID XP_012072445.1
description PREDICTED: uncharacterized protein LOC105634226 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KPX7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04874 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_030312_060 0.0 - - PREDICTED: uncharacterized protein LOC105634226 [Jatropha curcas]
2 Hb_034558_010 0.0653849297 - - -
3 Hb_128894_010 0.0655254555 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_106595_010 0.0691762736 - - hypothetical protein B456_003G065300 [Gossypium raimondii]
5 Hb_044724_020 0.0740568086 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Fragaria vesca subsp. vesca]
6 Hb_007264_050 0.075790538 - - -
7 Hb_001766_090 0.0773430745 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
8 Hb_007658_030 0.0795959291 - - PREDICTED: lupeol synthase-like isoform X1 [Populus euphratica]
9 Hb_000215_380 0.0799318469 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
10 Hb_006124_040 0.0802322262 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
11 Hb_007328_020 0.0807230548 - - -
12 Hb_000563_370 0.0811921476 - - hypothetical protein JCGZ_18919 [Jatropha curcas]
13 Hb_000484_050 0.0840134397 - - hypothetical protein CICLE_v10028549mg [Citrus clementina]
14 Hb_030593_010 0.0865460165 - - hypothetical protein JCGZ_06063 [Jatropha curcas]
15 Hb_001511_130 0.0870770849 - - PREDICTED: taxadien-5-alpha-ol O-acetyltransferase [Jatropha curcas]
16 Hb_011909_130 0.0963073769 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Populus euphratica]
17 Hb_064583_010 0.099410808 - - PREDICTED: germin-like protein subfamily 1 member 7 [Vitis vinifera]
18 Hb_023827_010 0.1001465094 - - Cucumber peeling cupredoxin, putative [Ricinus communis]
19 Hb_009740_010 0.1017689285 - - receptor-kinase, putative [Ricinus communis]
20 Hb_000016_290 0.1069112872 - - multidrug resistance pump, putative [Ricinus communis]

Gene co-expression network

sample Hb_030312_060 Hb_030312_060 Hb_034558_010 Hb_034558_010 Hb_030312_060--Hb_034558_010 Hb_128894_010 Hb_128894_010 Hb_030312_060--Hb_128894_010 Hb_106595_010 Hb_106595_010 Hb_030312_060--Hb_106595_010 Hb_044724_020 Hb_044724_020 Hb_030312_060--Hb_044724_020 Hb_007264_050 Hb_007264_050 Hb_030312_060--Hb_007264_050 Hb_001766_090 Hb_001766_090 Hb_030312_060--Hb_001766_090 Hb_034558_010--Hb_128894_010 Hb_034558_010--Hb_106595_010 Hb_007658_030 Hb_007658_030 Hb_034558_010--Hb_007658_030 Hb_034558_010--Hb_001766_090 Hb_034558_010--Hb_044724_020 Hb_000484_050 Hb_000484_050 Hb_034558_010--Hb_000484_050 Hb_128894_010--Hb_106595_010 Hb_128894_010--Hb_044724_020 Hb_000215_380 Hb_000215_380 Hb_128894_010--Hb_000215_380 Hb_007328_020 Hb_007328_020 Hb_128894_010--Hb_007328_020 Hb_000563_370 Hb_000563_370 Hb_128894_010--Hb_000563_370 Hb_106595_010--Hb_044724_020 Hb_106595_010--Hb_000215_380 Hb_106595_010--Hb_007328_020 Hb_106595_010--Hb_000563_370 Hb_044724_020--Hb_000215_380 Hb_044724_020--Hb_007328_020 Hb_044724_020--Hb_000563_370 Hb_044724_020--Hb_007264_050 Hb_007264_050--Hb_000215_380 Hb_007264_050--Hb_007328_020 Hb_007264_050--Hb_000563_370 Hb_007264_050--Hb_106595_010 Hb_064583_010 Hb_064583_010 Hb_007264_050--Hb_064583_010 Hb_030593_010 Hb_030593_010 Hb_001766_090--Hb_030593_010 Hb_023827_010 Hb_023827_010 Hb_001766_090--Hb_023827_010 Hb_001766_090--Hb_007658_030 Hb_001766_090--Hb_128894_010 Hb_001766_090--Hb_000484_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.00053 0.0178648 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.103808 0

CAGE analysis