Hb_028751_010

Information

Type -
Description -
Location Contig28751: 9943-10206
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_028751_010 0.0 - - -
2 Hb_001511_230 0.1924729181 - - PREDICTED: gibberellin 2-beta-dioxygenase 2 [Jatropha curcas]
3 Hb_004041_010 0.2529786047 - - conserved hypothetical protein [Ricinus communis]
4 Hb_004888_050 0.295965809 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
5 Hb_007586_020 0.296037554 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
6 Hb_000085_110 0.2965085832 - - hypothetical protein JCGZ_00957 [Jatropha curcas]
7 Hb_000245_240 0.2965769022 - - -
8 Hb_088224_010 0.2966717062 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
9 Hb_000368_130 0.2970740592 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000055_100 0.2971462451 - - polyprotein [Oryza australiensis]
11 Hb_157349_010 0.2980685375 - - PREDICTED: uncharacterized protein LOC102588546 [Solanum tuberosum]
12 Hb_073171_060 0.2986128849 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
13 Hb_001274_010 0.2992607253 - - -
14 Hb_010272_020 0.3003712956 - - hypothetical protein VITISV_030841 [Vitis vinifera]
15 Hb_000483_170 0.3036917668 transcription factor TF Family: NAC PREDICTED: protein FEZ [Jatropha curcas]
16 Hb_150498_010 0.3063072457 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
17 Hb_000589_430 0.3066008204 - - hypothetical protein JCGZ_01402 [Jatropha curcas]
18 Hb_003362_010 0.310491578 - - Actin-related protein 2/3 complex subunit 4 [Morus notabilis]
19 Hb_001792_010 0.3131400369 - - Uncharacterized protein TCM_043787 [Theobroma cacao]
20 Hb_002641_150 0.3133791929 - - PREDICTED: stachyose synthase-like [Citrus sinensis]

Gene co-expression network

sample Hb_028751_010 Hb_028751_010 Hb_001511_230 Hb_001511_230 Hb_028751_010--Hb_001511_230 Hb_004041_010 Hb_004041_010 Hb_028751_010--Hb_004041_010 Hb_004888_050 Hb_004888_050 Hb_028751_010--Hb_004888_050 Hb_007586_020 Hb_007586_020 Hb_028751_010--Hb_007586_020 Hb_000085_110 Hb_000085_110 Hb_028751_010--Hb_000085_110 Hb_000245_240 Hb_000245_240 Hb_028751_010--Hb_000245_240 Hb_002123_030 Hb_002123_030 Hb_001511_230--Hb_002123_030 Hb_012253_020 Hb_012253_020 Hb_001511_230--Hb_012253_020 Hb_001799_220 Hb_001799_220 Hb_001511_230--Hb_001799_220 Hb_000072_040 Hb_000072_040 Hb_001511_230--Hb_000072_040 Hb_001511_230--Hb_004041_010 Hb_004041_010--Hb_012253_020 Hb_007659_010 Hb_007659_010 Hb_004041_010--Hb_007659_010 Hb_002224_050 Hb_002224_050 Hb_004041_010--Hb_002224_050 Hb_007044_280 Hb_007044_280 Hb_004041_010--Hb_007044_280 Hb_018591_040 Hb_018591_040 Hb_004041_010--Hb_018591_040 Hb_004888_050--Hb_007586_020 Hb_157349_010 Hb_157349_010 Hb_004888_050--Hb_157349_010 Hb_001274_010 Hb_001274_010 Hb_004888_050--Hb_001274_010 Hb_004888_050--Hb_000085_110 Hb_004888_050--Hb_000245_240 Hb_088224_010 Hb_088224_010 Hb_004888_050--Hb_088224_010 Hb_007586_020--Hb_157349_010 Hb_007586_020--Hb_001274_010 Hb_007586_020--Hb_000085_110 Hb_007586_020--Hb_000245_240 Hb_007586_020--Hb_088224_010 Hb_000085_110--Hb_000245_240 Hb_000085_110--Hb_088224_010 Hb_000368_130 Hb_000368_130 Hb_000085_110--Hb_000368_130 Hb_000055_100 Hb_000055_100 Hb_000085_110--Hb_000055_100 Hb_073171_060 Hb_073171_060 Hb_000085_110--Hb_073171_060 Hb_010272_020 Hb_010272_020 Hb_000085_110--Hb_010272_020 Hb_000245_240--Hb_088224_010 Hb_000245_240--Hb_000368_130 Hb_000245_240--Hb_000055_100 Hb_000245_240--Hb_073171_060 Hb_000245_240--Hb_010272_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 2.04991
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.981012 0.595613

CAGE analysis