Hb_022092_120

Information

Type -
Description -
Location Contig22092: 71987-75944
Sequence    

Annotation

kegg
ID rcu:RCOM_1175860
description hypothetical protein
nr
ID XP_012088328.1
description PREDICTED: uncharacterized protein LOC105646971 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JJL9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25823 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22765: 72094-76441
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022092_120 0.0 - - PREDICTED: uncharacterized protein LOC105646971 [Jatropha curcas]
2 Hb_000221_210 0.1078984092 - - Kinase superfamily protein isoform 2 [Theobroma cacao]
3 Hb_000395_080 0.112983524 - - PREDICTED: uncharacterized protein LOC105645573 isoform X1 [Jatropha curcas]
4 Hb_005396_050 0.1140785599 - - PREDICTED: phosphoenolpyruvate carboxylase 4 [Jatropha curcas]
5 Hb_000005_330 0.1162569038 transcription factor TF Family: ARF PREDICTED: auxin response factor 6 isoform X2 [Jatropha curcas]
6 Hb_000237_080 0.1214952284 transcription factor TF Family: PHD PREDICTED: chromatin structure-remodeling complex subunit RSC1 [Jatropha curcas]
7 Hb_002137_020 0.1215511432 - - ubiquitin-protein ligase, putative [Ricinus communis]
8 Hb_001541_270 0.1219539417 - - PREDICTED: uncharacterized protein LOC105644666 [Jatropha curcas]
9 Hb_000445_180 0.1228524811 transcription factor TF Family: TRAF PREDICTED: BTB/POZ domain-containing protein At4g08455 [Jatropha curcas]
10 Hb_009615_150 0.1242252726 - - PREDICTED: transcription elongation factor SPT4 homolog 2 [Jatropha curcas]
11 Hb_001386_120 0.1255243885 - - PREDICTED: yrdC domain-containing protein, mitochondrial [Jatropha curcas]
12 Hb_000696_340 0.1271637397 - - PREDICTED: uncharacterized protein LOC105647255 [Jatropha curcas]
13 Hb_021254_030 0.1277008868 - - PREDICTED: mitochondrial substrate carrier family protein P [Jatropha curcas]
14 Hb_000261_440 0.1310602683 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
15 Hb_004242_060 0.1316245205 - - PREDICTED: nicotinamidase 2-like [Jatropha curcas]
16 Hb_005215_030 0.1322161313 - - FAD-dependent oxidoreductase family protein [Populus trichocarpa]
17 Hb_001318_030 0.1329762389 - - PREDICTED: uncharacterized protein LOC105642686 [Jatropha curcas]
18 Hb_001811_150 0.133585271 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 28-like isoform X2 [Jatropha curcas]
19 Hb_020178_070 0.1348860256 - - Protein Z, putative [Ricinus communis]
20 Hb_001477_130 0.1350624095 - - PREDICTED: uncharacterized protein LOC105646871 [Jatropha curcas]

Gene co-expression network

sample Hb_022092_120 Hb_022092_120 Hb_000221_210 Hb_000221_210 Hb_022092_120--Hb_000221_210 Hb_000395_080 Hb_000395_080 Hb_022092_120--Hb_000395_080 Hb_005396_050 Hb_005396_050 Hb_022092_120--Hb_005396_050 Hb_000005_330 Hb_000005_330 Hb_022092_120--Hb_000005_330 Hb_000237_080 Hb_000237_080 Hb_022092_120--Hb_000237_080 Hb_002137_020 Hb_002137_020 Hb_022092_120--Hb_002137_020 Hb_000696_340 Hb_000696_340 Hb_000221_210--Hb_000696_340 Hb_000086_060 Hb_000086_060 Hb_000221_210--Hb_000086_060 Hb_000445_180 Hb_000445_180 Hb_000221_210--Hb_000445_180 Hb_000221_210--Hb_002137_020 Hb_005941_040 Hb_005941_040 Hb_000221_210--Hb_005941_040 Hb_003057_100 Hb_003057_100 Hb_000221_210--Hb_003057_100 Hb_011828_020 Hb_011828_020 Hb_000395_080--Hb_011828_020 Hb_000877_060 Hb_000877_060 Hb_000395_080--Hb_000877_060 Hb_001477_130 Hb_001477_130 Hb_000395_080--Hb_001477_130 Hb_000395_080--Hb_000696_340 Hb_000395_080--Hb_002137_020 Hb_005215_030 Hb_005215_030 Hb_000395_080--Hb_005215_030 Hb_156850_030 Hb_156850_030 Hb_005396_050--Hb_156850_030 Hb_005396_050--Hb_000237_080 Hb_001220_030 Hb_001220_030 Hb_005396_050--Hb_001220_030 Hb_004785_060 Hb_004785_060 Hb_005396_050--Hb_004785_060 Hb_001318_030 Hb_001318_030 Hb_005396_050--Hb_001318_030 Hb_000976_150 Hb_000976_150 Hb_005396_050--Hb_000976_150 Hb_000049_120 Hb_000049_120 Hb_000005_330--Hb_000049_120 Hb_000261_440 Hb_000261_440 Hb_000005_330--Hb_000261_440 Hb_000005_330--Hb_005215_030 Hb_000589_270 Hb_000589_270 Hb_000005_330--Hb_000589_270 Hb_020178_070 Hb_020178_070 Hb_000005_330--Hb_020178_070 Hb_000237_080--Hb_001318_030 Hb_000237_080--Hb_004785_060 Hb_009615_150 Hb_009615_150 Hb_000237_080--Hb_009615_150 Hb_002813_050 Hb_002813_050 Hb_000237_080--Hb_002813_050 Hb_005147_090 Hb_005147_090 Hb_000237_080--Hb_005147_090 Hb_000859_060 Hb_000859_060 Hb_000237_080--Hb_000859_060 Hb_004223_280 Hb_004223_280 Hb_002137_020--Hb_004223_280 Hb_007441_230 Hb_007441_230 Hb_002137_020--Hb_007441_230 Hb_000571_120 Hb_000571_120 Hb_002137_020--Hb_000571_120 Hb_012022_030 Hb_012022_030 Hb_002137_020--Hb_012022_030 Hb_003464_060 Hb_003464_060 Hb_002137_020--Hb_003464_060 Hb_002016_110 Hb_002016_110 Hb_002137_020--Hb_002016_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
74.7889 97.7771 19.8407 19.0275 73.0189 95.6922
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
169.051 68.1527 91.3342 37.6804 20.6572

CAGE analysis