Hb_017358_060

Information

Type -
Description -
Location Contig17358: 50509-51268
Sequence    

Annotation

kegg
ID rcu:RCOM_0346870
description hypothetical protein
nr
ID XP_012081468.1
description PREDICTED: uncharacterized protein LOC105641510 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KDK1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18498 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16524: 50647-51464
cDNA
(Sanger)
(ID:Location)		 014_H10.ab1: 50647-51464 , 025_L12.ab1: 50647-51464

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_017358_060 0.0 - - PREDICTED: uncharacterized protein LOC105641510 [Jatropha curcas]
2 Hb_155874_020 0.066281645 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
3 Hb_003729_050 0.0728173591 - - PREDICTED: vacuolar iron transporter 1-like isoform X1 [Jatropha curcas]
4 Hb_132840_060 0.0755795147 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH57-like [Jatropha curcas]
5 Hb_000853_340 0.0789418638 - - PREDICTED: kynurenine--oxoglutarate transaminase 1-like isoform X2 [Populus euphratica]
6 Hb_000556_050 0.0838778452 - - -
7 Hb_008032_010 0.0873971606 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
8 Hb_008195_100 0.0879426763 transcription factor TF Family: C2C2-YABBY PREDICTED: protein YABBY 4 [Vitis vinifera]
9 Hb_019762_030 0.0913762577 - - hypothetical protein POPTR_0002s08720g [Populus trichocarpa]
10 Hb_063584_010 0.0940855819 - - hypothetical protein JCGZ_10530 [Jatropha curcas]
11 Hb_006355_100 0.0965310373 - - hypothetical protein glysoja_002455 [Glycine soja]
12 Hb_005198_010 0.0982577656 transcription factor TF Family: C2C2-YABBY PREDICTED: axial regulator YABBY 5 [Jatropha curcas]
13 Hb_000023_170 0.1028133892 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Jatropha curcas]
14 Hb_003702_010 0.1037176706 - - PREDICTED: phospholipase A1-II 1-like [Jatropha curcas]
15 Hb_009189_090 0.1051632227 - - protein phosphatase-2c, putative [Ricinus communis]
16 Hb_097104_010 0.1082624639 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
17 Hb_000173_330 0.1093100925 - - PREDICTED: glutamine synthetase leaf isozyme, chloroplastic [Vitis vinifera]
18 Hb_005375_100 0.1099918342 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH57-like [Jatropha curcas]
19 Hb_000032_130 0.1102778212 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 12 [Jatropha curcas]
20 Hb_002701_100 0.1126826799 transcription factor TF Family: MIKC PREDICTED: truncated transcription factor CAULIFLOWER A-like [Jatropha curcas]

Gene co-expression network

sample Hb_017358_060 Hb_017358_060 Hb_155874_020 Hb_155874_020 Hb_017358_060--Hb_155874_020 Hb_003729_050 Hb_003729_050 Hb_017358_060--Hb_003729_050 Hb_132840_060 Hb_132840_060 Hb_017358_060--Hb_132840_060 Hb_000853_340 Hb_000853_340 Hb_017358_060--Hb_000853_340 Hb_000556_050 Hb_000556_050 Hb_017358_060--Hb_000556_050 Hb_008032_010 Hb_008032_010 Hb_017358_060--Hb_008032_010 Hb_155874_020--Hb_132840_060 Hb_155874_020--Hb_000853_340 Hb_003702_010 Hb_003702_010 Hb_155874_020--Hb_003702_010 Hb_000023_170 Hb_000023_170 Hb_155874_020--Hb_000023_170 Hb_008195_100 Hb_008195_100 Hb_155874_020--Hb_008195_100 Hb_155874_020--Hb_008032_010 Hb_006355_100 Hb_006355_100 Hb_003729_050--Hb_006355_100 Hb_003729_050--Hb_008032_010 Hb_003729_050--Hb_132840_060 Hb_002701_100 Hb_002701_100 Hb_003729_050--Hb_002701_100 Hb_003729_050--Hb_155874_020 Hb_009189_090 Hb_009189_090 Hb_003729_050--Hb_009189_090 Hb_132840_060--Hb_008032_010 Hb_132840_060--Hb_009189_090 Hb_132840_060--Hb_000023_170 Hb_132840_060--Hb_006355_100 Hb_019762_030 Hb_019762_030 Hb_000853_340--Hb_019762_030 Hb_000853_340--Hb_003702_010 Hb_000853_340--Hb_008195_100 Hb_000853_340--Hb_000023_170 Hb_000853_340--Hb_132840_060 Hb_005198_010 Hb_005198_010 Hb_000556_050--Hb_005198_010 Hb_000005_160 Hb_000005_160 Hb_000556_050--Hb_000005_160 Hb_000152_200 Hb_000152_200 Hb_000556_050--Hb_000152_200 Hb_000556_050--Hb_019762_030 Hb_177533_010 Hb_177533_010 Hb_000556_050--Hb_177533_010 Hb_007741_010 Hb_007741_010 Hb_000556_050--Hb_007741_010 Hb_008032_010--Hb_006355_100 Hb_008032_010--Hb_009189_090 Hb_008032_010--Hb_000023_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 25.2685 0.672904 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 4.57965

CAGE analysis