Hb_006355_100

Information

Type -
Description -
Location Contig6355: 124410-128636
Sequence    

Annotation

kegg
ID cic:CICLE_v10022672mg
description hypothetical protein
nr
ID KHN02431.1
description hypothetical protein glysoja_002455 [Glycine soja]
swissprot
ID -
description -
trembl
ID A0A0B2NZ52
description Uncharacterized protein OS=Glycine soja GN=glysoja_002455 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006355_100 0.0 - - hypothetical protein glysoja_002455 [Glycine soja]
2 Hb_008032_010 0.0171054797 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
3 Hb_003729_050 0.0254280119 - - PREDICTED: vacuolar iron transporter 1-like isoform X1 [Jatropha curcas]
4 Hb_132840_060 0.033893015 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH57-like [Jatropha curcas]
5 Hb_009189_090 0.0384689378 - - protein phosphatase-2c, putative [Ricinus communis]
6 Hb_002701_100 0.0448418061 transcription factor TF Family: MIKC PREDICTED: truncated transcription factor CAULIFLOWER A-like [Jatropha curcas]
7 Hb_000023_170 0.049583756 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Jatropha curcas]
8 Hb_155874_020 0.0603109879 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
9 Hb_001033_080 0.0657185428 transcription factor TF Family: C2H2 Transcriptional regulator SUPERMAN, putative [Ricinus communis]
10 Hb_000016_140 0.0667019586 - - glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis]
11 Hb_003702_010 0.0670406369 - - PREDICTED: phospholipase A1-II 1-like [Jatropha curcas]
12 Hb_008195_100 0.0717336932 transcription factor TF Family: C2C2-YABBY PREDICTED: protein YABBY 4 [Vitis vinifera]
13 Hb_000334_020 0.0717496353 - - PREDICTED: dynein light chain 2, cytoplasmic [Jatropha curcas]
14 Hb_005357_210 0.0789171022 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein MERISTEM L1 [Jatropha curcas]
15 Hb_005375_100 0.0889114365 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH57-like [Jatropha curcas]
16 Hb_000853_340 0.0937812731 - - PREDICTED: kynurenine--oxoglutarate transaminase 1-like isoform X2 [Populus euphratica]
17 Hb_000173_330 0.0941913516 - - PREDICTED: glutamine synthetase leaf isozyme, chloroplastic [Vitis vinifera]
18 Hb_017358_060 0.0965310373 - - PREDICTED: uncharacterized protein LOC105641510 [Jatropha curcas]
19 Hb_001085_280 0.0974973905 transcription factor TF Family: bHLH PREDICTED: transcription factor FAMA isoform X2 [Populus euphratica]
20 Hb_025048_050 0.0987449208 - - PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 3 [Jatropha curcas]

Gene co-expression network

sample Hb_006355_100 Hb_006355_100 Hb_008032_010 Hb_008032_010 Hb_006355_100--Hb_008032_010 Hb_003729_050 Hb_003729_050 Hb_006355_100--Hb_003729_050 Hb_132840_060 Hb_132840_060 Hb_006355_100--Hb_132840_060 Hb_009189_090 Hb_009189_090 Hb_006355_100--Hb_009189_090 Hb_002701_100 Hb_002701_100 Hb_006355_100--Hb_002701_100 Hb_000023_170 Hb_000023_170 Hb_006355_100--Hb_000023_170 Hb_008032_010--Hb_132840_060 Hb_008032_010--Hb_003729_050 Hb_008032_010--Hb_009189_090 Hb_008032_010--Hb_000023_170 Hb_155874_020 Hb_155874_020 Hb_008032_010--Hb_155874_020 Hb_003729_050--Hb_132840_060 Hb_003729_050--Hb_002701_100 Hb_003729_050--Hb_155874_020 Hb_003729_050--Hb_009189_090 Hb_132840_060--Hb_155874_020 Hb_132840_060--Hb_009189_090 Hb_132840_060--Hb_000023_170 Hb_009189_090--Hb_000023_170 Hb_003702_010 Hb_003702_010 Hb_009189_090--Hb_003702_010 Hb_005357_210 Hb_005357_210 Hb_009189_090--Hb_005357_210 Hb_002701_100--Hb_008032_010 Hb_000016_140 Hb_000016_140 Hb_002701_100--Hb_000016_140 Hb_002701_100--Hb_132840_060 Hb_000334_020 Hb_000334_020 Hb_002701_100--Hb_000334_020 Hb_000023_170--Hb_003702_010 Hb_000023_170--Hb_155874_020 Hb_000023_170--Hb_005357_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 2.85994 0.121094 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.913096

CAGE analysis