Hb_011942_090

Information

Type -
Description -
Location Contig11942: 50410-68762
Sequence    

Annotation

kegg
ID rcu:RCOM_1442980
description serine/threonine protein kinase, putative (EC:2.7.11.25)
nr
ID XP_012067443.1
description PREDICTED: serine/threonine-protein kinase OSR1 isoform X1 [Jatropha curcas]
swissprot
ID Q551H4
description Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1
trembl
ID A0A067L0G8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26940 PE=4 SV=1
Gene Ontology
ID GO:0005622
description kinase superfamily protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05749: 50199-50510 , PASA_asmbl_05750: 51772-54016 , PASA_asmbl_05751: 55535-66835
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011942_090 0.0 - - PREDICTED: serine/threonine-protein kinase OSR1 isoform X1 [Jatropha curcas]
2 Hb_000676_150 0.099878425 - - 50S ribosomal protein L7/L12, putative [Ricinus communis]
3 Hb_000291_080 0.1008609986 - - Vacuolar protein sorting-associated protein VPS9, putative [Ricinus communis]
4 Hb_001414_030 0.1009510936 - - PREDICTED: aspartate-semialdehyde dehydrogenase [Jatropha curcas]
5 Hb_000820_090 0.1041530436 - - -
6 Hb_006420_100 0.1063533959 - - PREDICTED: protein bicaudal C homolog 1 [Jatropha curcas]
7 Hb_002111_040 0.1108629064 - - hypothetical protein JCGZ_16989 [Jatropha curcas]
8 Hb_001357_300 0.1113020617 - - PREDICTED: imidazole glycerol phosphate synthase hisHF, chloroplastic isoform X1 [Jatropha curcas]
9 Hb_000096_160 0.1124128118 transcription factor TF Family: MYB-related PREDICTED: telomere repeat-binding factor 2 [Jatropha curcas]
10 Hb_034380_020 0.1151924899 - - PREDICTED: phosphoglycerate mutase-like [Jatropha curcas]
11 Hb_019654_030 0.1155331703 - - maoC-like dehydratase domain-containing family protein [Populus trichocarpa]
12 Hb_000120_460 0.1175160884 - - PREDICTED: thioredoxin reductase NTRB-like [Jatropha curcas]
13 Hb_001390_130 0.1189304871 - - hypothetical protein POPTR_0009s08590g [Populus trichocarpa]
14 Hb_012490_070 0.1192238142 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000072_320 0.119580356 - - PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Jatropha curcas]
16 Hb_005305_150 0.1228676399 - - PREDICTED: 40S ribosomal protein S2-4-like [Jatropha curcas]
17 Hb_002835_100 0.1243253697 - - PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 6-like [Jatropha curcas]
18 Hb_000976_170 0.1247919862 - - PREDICTED: ATPase family AAA domain-containing protein 3-like [Jatropha curcas]
19 Hb_006698_080 0.126625173 - - PREDICTED: tobamovirus multiplication protein 1 isoform X2 [Jatropha curcas]
20 Hb_000982_080 0.1275947673 desease resistance Gene Name: AAA PREDICTED: 26S proteasome regulatory subunit 4 homolog A [Jatropha curcas]

Gene co-expression network

sample Hb_011942_090 Hb_011942_090 Hb_000676_150 Hb_000676_150 Hb_011942_090--Hb_000676_150 Hb_000291_080 Hb_000291_080 Hb_011942_090--Hb_000291_080 Hb_001414_030 Hb_001414_030 Hb_011942_090--Hb_001414_030 Hb_000820_090 Hb_000820_090 Hb_011942_090--Hb_000820_090 Hb_006420_100 Hb_006420_100 Hb_011942_090--Hb_006420_100 Hb_002111_040 Hb_002111_040 Hb_011942_090--Hb_002111_040 Hb_005183_120 Hb_005183_120 Hb_000676_150--Hb_005183_120 Hb_034380_020 Hb_034380_020 Hb_000676_150--Hb_034380_020 Hb_000482_090 Hb_000482_090 Hb_000676_150--Hb_000482_090 Hb_000165_160 Hb_000165_160 Hb_000676_150--Hb_000165_160 Hb_127552_030 Hb_127552_030 Hb_000676_150--Hb_127552_030 Hb_001390_130 Hb_001390_130 Hb_000291_080--Hb_001390_130 Hb_000291_080--Hb_002111_040 Hb_000291_080--Hb_000820_090 Hb_003697_040 Hb_003697_040 Hb_000291_080--Hb_003697_040 Hb_004696_080 Hb_004696_080 Hb_000291_080--Hb_004696_080 Hb_000363_360 Hb_000363_360 Hb_000291_080--Hb_000363_360 Hb_000329_760 Hb_000329_760 Hb_001414_030--Hb_000329_760 Hb_016522_010 Hb_016522_010 Hb_001414_030--Hb_016522_010 Hb_000982_080 Hb_000982_080 Hb_001414_030--Hb_000982_080 Hb_001414_030--Hb_034380_020 Hb_001357_300 Hb_001357_300 Hb_001414_030--Hb_001357_300 Hb_005488_200 Hb_005488_200 Hb_000820_090--Hb_005488_200 Hb_008232_010 Hb_008232_010 Hb_000820_090--Hb_008232_010 Hb_000820_090--Hb_000982_080 Hb_000820_090--Hb_002111_040 Hb_004672_010 Hb_004672_010 Hb_000820_090--Hb_004672_010 Hb_000072_180 Hb_000072_180 Hb_006420_100--Hb_000072_180 Hb_006420_100--Hb_002111_040 Hb_000046_350 Hb_000046_350 Hb_006420_100--Hb_000046_350 Hb_002183_060 Hb_002183_060 Hb_006420_100--Hb_002183_060 Hb_001545_170 Hb_001545_170 Hb_006420_100--Hb_001545_170 Hb_000023_090 Hb_000023_090 Hb_006420_100--Hb_000023_090 Hb_005305_110 Hb_005305_110 Hb_002111_040--Hb_005305_110 Hb_000028_350 Hb_000028_350 Hb_002111_040--Hb_000028_350 Hb_031862_100 Hb_031862_100 Hb_002111_040--Hb_031862_100 Hb_002111_040--Hb_001390_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.50731 0.857554 1.77492 2.61893 2.44915 2.85624
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.41742 5.42902 5.45294 5.73426 2.83343

CAGE analysis