Hb_011931_050

Information

Type -
Description -
Location Contig11931: 28332-31734
Sequence    

Annotation

kegg
ID rcu:RCOM_0242140
description fk506-binding protein, putative (EC:5.2.1.8)
nr
ID XP_002534360.1
description fk506-binding protein, putative [Ricinus communis]
swissprot
ID Q38935
description Peptidyl-prolyl cis-trans isomerase FKBP15-1 OS=Arabidopsis thaliana GN=FKBP15-1 PE=2 SV=2
trembl
ID B9T7Z1
description Peptidyl-prolyl cis-trans isomerase OS=Ricinus communis GN=RCOM_0242140 PE=4 SV=1
Gene Ontology
ID GO:0003755
description peptidyl-prolyl cis-trans isomerase fkbp15-1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05728: 28325-31702
cDNA
(Sanger)
(ID:Location)		 015_B21.ab1: 28349-31518 , 041_L15.ab1: 28337-31630

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011931_050 0.0 - - fk506-binding protein, putative [Ricinus communis]
2 Hb_070986_010 0.0884024385 - - PREDICTED: macrophage erythroblast attacher [Jatropha curcas]
3 Hb_000316_110 0.0886446917 - - Dolichyl-phosphate beta-glucosyltransferase, putative [Ricinus communis]
4 Hb_000061_330 0.0927026286 - - eukaryotic translation initiation factor 5A isoform VII [Hevea brasiliensis]
5 Hb_001623_240 0.0944595928 - - hypothetical protein VITISV_004933 [Vitis vinifera]
6 Hb_000045_190 0.0953671339 - - PREDICTED: eukaryotic translation initiation factor 3 subunit F [Jatropha curcas]
7 Hb_000634_050 0.1018091332 - - PREDICTED: uncharacterized protein LOC105636623 [Jatropha curcas]
8 Hb_046157_020 0.1030809393 - - PREDICTED: uncharacterized protein LOC105647566 [Jatropha curcas]
9 Hb_010883_150 0.1041083889 - - Ubiquitin-fold modifier 1 precursor, putative [Ricinus communis]
10 Hb_007166_050 0.1053872483 - - -
11 Hb_005611_010 0.1054372585 - - PREDICTED: protein prune homolog [Jatropha curcas]
12 Hb_001584_070 0.108278168 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000798_030 0.108513296 - - PREDICTED: uncharacterized protein LOC105635919 [Jatropha curcas]
14 Hb_003057_050 0.1109696631 - - PREDICTED: uncharacterized protein LOC105635336 [Jatropha curcas]
15 Hb_000526_150 0.1123035643 - - hypothetical protein POPTR_0019s10790g, partial [Populus trichocarpa]
16 Hb_004297_070 0.1123410672 - - hypothetical protein POPTR_0009s14820g [Populus trichocarpa]
17 Hb_000365_380 0.1123575537 - - conserved hypothetical protein [Ricinus communis]
18 Hb_004657_020 0.1125374832 - - rer1 protein, putative [Ricinus communis]
19 Hb_012515_010 0.1141216579 - - PREDICTED: 60S ribosomal protein L30-like [Gossypium raimondii]
20 Hb_002447_030 0.1151517584 - - PREDICTED: cytochrome b5 domain-containing protein RLF [Jatropha curcas]

Gene co-expression network

sample Hb_011931_050 Hb_011931_050 Hb_070986_010 Hb_070986_010 Hb_011931_050--Hb_070986_010 Hb_000316_110 Hb_000316_110 Hb_011931_050--Hb_000316_110 Hb_000061_330 Hb_000061_330 Hb_011931_050--Hb_000061_330 Hb_001623_240 Hb_001623_240 Hb_011931_050--Hb_001623_240 Hb_000045_190 Hb_000045_190 Hb_011931_050--Hb_000045_190 Hb_000634_050 Hb_000634_050 Hb_011931_050--Hb_000634_050 Hb_004204_120 Hb_004204_120 Hb_070986_010--Hb_004204_120 Hb_001584_070 Hb_001584_070 Hb_070986_010--Hb_001584_070 Hb_002105_090 Hb_002105_090 Hb_070986_010--Hb_002105_090 Hb_000798_030 Hb_000798_030 Hb_070986_010--Hb_000798_030 Hb_010883_150 Hb_010883_150 Hb_070986_010--Hb_010883_150 Hb_001257_080 Hb_001257_080 Hb_070986_010--Hb_001257_080 Hb_006569_020 Hb_006569_020 Hb_000316_110--Hb_006569_020 Hb_007166_050 Hb_007166_050 Hb_000316_110--Hb_007166_050 Hb_001019_090 Hb_001019_090 Hb_000316_110--Hb_001019_090 Hb_009711_030 Hb_009711_030 Hb_000316_110--Hb_009711_030 Hb_159558_030 Hb_159558_030 Hb_000316_110--Hb_159558_030 Hb_022250_040 Hb_022250_040 Hb_000316_110--Hb_022250_040 Hb_000061_330--Hb_010883_150 Hb_005686_110 Hb_005686_110 Hb_000061_330--Hb_005686_110 Hb_000479_180 Hb_000479_180 Hb_000061_330--Hb_000479_180 Hb_000061_330--Hb_001584_070 Hb_000061_330--Hb_000634_050 Hb_002529_100 Hb_002529_100 Hb_001623_240--Hb_002529_100 Hb_004607_140 Hb_004607_140 Hb_001623_240--Hb_004607_140 Hb_004724_140 Hb_004724_140 Hb_001623_240--Hb_004724_140 Hb_000163_200 Hb_000163_200 Hb_001623_240--Hb_000163_200 Hb_000699_110 Hb_000699_110 Hb_001623_240--Hb_000699_110 Hb_000045_190--Hb_000634_050 Hb_000045_190--Hb_000798_030 Hb_000120_750 Hb_000120_750 Hb_000045_190--Hb_000120_750 Hb_001153_080 Hb_001153_080 Hb_000045_190--Hb_001153_080 Hb_001045_080 Hb_001045_080 Hb_000045_190--Hb_001045_080 Hb_000045_190--Hb_002529_100 Hb_000417_110 Hb_000417_110 Hb_000634_050--Hb_000417_110 Hb_000634_050--Hb_001584_070 Hb_002781_020 Hb_002781_020 Hb_000634_050--Hb_002781_020 Hb_000634_050--Hb_000798_030 Hb_000526_150 Hb_000526_150 Hb_000634_050--Hb_000526_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
576.655 56.169 115.924 205.049 357.551 490.521
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
962.165 777.234 248.9 201.31 45.893

CAGE analysis