Hb_006775_080

Information

Type -
Description -
Location Contig6775: 59444-60479
Sequence    

Annotation

kegg
ID rcu:RCOM_1252970
description hypothetical protein
nr
ID XP_012091862.1
description PREDICTED: uncharacterized protein LOC105649730 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JMF0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21641 PE=4 SV=1
Gene Ontology
ID GO:0016740
description adenine phosphoribosyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53613: 59365-60266
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006775_080 0.0 - - PREDICTED: uncharacterized protein LOC105649730 [Jatropha curcas]
2 Hb_004012_010 0.071424429 - - PREDICTED: 40S ribosomal protein S15a-1-like [Gossypium raimondii]
3 Hb_004920_040 0.0751245878 - - PREDICTED: probable dimethyladenosine transferase [Jatropha curcas]
4 Hb_000056_340 0.0785094537 - - 60S ribosomal protein L34A [Hevea brasiliensis]
5 Hb_006824_020 0.081187515 - - PREDICTED: thioredoxin domain-containing protein 9 homolog [Jatropha curcas]
6 Hb_024835_030 0.0820739295 - - ubiquitin-conjugating enzyme E2, putative [Ricinus communis]
7 Hb_021068_050 0.0851355275 - - PREDICTED: probable rhamnogalacturonate lyase B [Jatropha curcas]
8 Hb_002529_100 0.0900402905 - - PREDICTED: DET1- and DDB1-associated protein 1 isoform X1 [Jatropha curcas]
9 Hb_026198_050 0.0900594012 - - PREDICTED: subtilisin-like protease SBT3.3 [Jatropha curcas]
10 Hb_000392_270 0.0901486559 - - PREDICTED: 40S ribosomal protein S9-2 [Jatropha curcas]
11 Hb_002762_060 0.0918601009 - - PREDICTED: diphthine methyltransferase homolog [Jatropha curcas]
12 Hb_001138_050 0.0927930997 - - hypothetical protein JCGZ_15696 [Jatropha curcas]
13 Hb_000412_110 0.0930639178 - - Rop4 [Hevea brasiliensis]
14 Hb_010449_020 0.0934655879 - - PREDICTED: rRNA-processing protein UTP23 homolog [Jatropha curcas]
15 Hb_001951_110 0.0937856257 - - PREDICTED: DNA-binding protein DDB_G0278111 [Jatropha curcas]
16 Hb_003185_020 0.0964424043 transcription factor TF Family: GNAT PREDICTED: N-alpha-acetyltransferase 50 [Jatropha curcas]
17 Hb_000676_220 0.0982077964 - - ADP-ribosylation factor, putative [Ricinus communis]
18 Hb_000732_260 0.0983665208 - - PREDICTED: telomerase Cajal body protein 1 [Jatropha curcas]
19 Hb_003540_040 0.0990731788 - - hypothetical protein JCGZ_20979 [Jatropha curcas]
20 Hb_000041_080 0.1015127562 - - PREDICTED: universal stress protein A-like protein [Jatropha curcas]

Gene co-expression network

sample Hb_006775_080 Hb_006775_080 Hb_004012_010 Hb_004012_010 Hb_006775_080--Hb_004012_010 Hb_004920_040 Hb_004920_040 Hb_006775_080--Hb_004920_040 Hb_000056_340 Hb_000056_340 Hb_006775_080--Hb_000056_340 Hb_006824_020 Hb_006824_020 Hb_006775_080--Hb_006824_020 Hb_024835_030 Hb_024835_030 Hb_006775_080--Hb_024835_030 Hb_021068_050 Hb_021068_050 Hb_006775_080--Hb_021068_050 Hb_004012_010--Hb_024835_030 Hb_026198_050 Hb_026198_050 Hb_004012_010--Hb_026198_050 Hb_004012_010--Hb_004920_040 Hb_003185_020 Hb_003185_020 Hb_004012_010--Hb_003185_020 Hb_002762_060 Hb_002762_060 Hb_004012_010--Hb_002762_060 Hb_004920_040--Hb_002762_060 Hb_004920_040--Hb_024835_030 Hb_001138_050 Hb_001138_050 Hb_004920_040--Hb_001138_050 Hb_004221_010 Hb_004221_010 Hb_004920_040--Hb_004221_010 Hb_007101_150 Hb_007101_150 Hb_000056_340--Hb_007101_150 Hb_003018_200 Hb_003018_200 Hb_000056_340--Hb_003018_200 Hb_007672_010 Hb_007672_010 Hb_000056_340--Hb_007672_010 Hb_001828_090 Hb_001828_090 Hb_000056_340--Hb_001828_090 Hb_000056_340--Hb_024835_030 Hb_000056_340--Hb_004012_010 Hb_001767_100 Hb_001767_100 Hb_006824_020--Hb_001767_100 Hb_000732_260 Hb_000732_260 Hb_006824_020--Hb_000732_260 Hb_006824_020--Hb_021068_050 Hb_000676_220 Hb_000676_220 Hb_006824_020--Hb_000676_220 Hb_006569_020 Hb_006569_020 Hb_006824_020--Hb_006569_020 Hb_024835_030--Hb_002762_060 Hb_009711_030 Hb_009711_030 Hb_024835_030--Hb_009711_030 Hb_022250_040 Hb_022250_040 Hb_024835_030--Hb_022250_040 Hb_000376_050 Hb_000376_050 Hb_021068_050--Hb_000376_050 Hb_002603_100 Hb_002603_100 Hb_021068_050--Hb_002603_100 Hb_021068_050--Hb_024835_030 Hb_021068_050--Hb_022250_040 Hb_021068_050--Hb_004012_010 Hb_021068_050--Hb_026198_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
31.07 10.5935 3.75417 4.44131 22.5144 16.5364
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
32.824 28.0614 19.4402 7.25373 4.49282

CAGE analysis