Hb_006076_030

Information

Type desease resistance
Description Gene Name: NB-ARC
Location Contig6076: 26160-27324
Sequence    

Annotation

kegg
ID pxb:103939424
description putative disease resistance protein At3g14460
nr
ID ABQ10222.1
description NBS resistance protein [Hevea brasiliensis]
swissprot
ID -
description -
trembl
ID A5HDW0
description NBS resistance protein (Fragment) OS=Hevea brasiliensis PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006076_030 0.0 desease resistance Gene Name: NB-ARC NBS resistance protein [Hevea brasiliensis]
2 Hb_003734_130 0.1327876075 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 [Jatropha curcas]
3 Hb_000027_270 0.1339556579 - - PREDICTED: zinc finger protein 6 [Jatropha curcas]
4 Hb_019613_020 0.137763444 - - phospholipase C, putative [Ricinus communis]
5 Hb_002377_050 0.1421582837 - - Agmatine deiminase, putative [Ricinus communis]
6 Hb_003581_140 0.1440834421 - - PREDICTED: hypersensitive-induced response protein 1-like [Nelumbo nucifera]
7 Hb_035524_030 0.144628915 - - conserved hypothetical protein [Ricinus communis]
8 Hb_127979_010 0.1484910048 - - PREDICTED: uncharacterized protein LOC105629383 [Jatropha curcas]
9 Hb_001454_060 0.1506148816 - - uncharacterized protein LOC100527252 [Glycine max]
10 Hb_006478_110 0.1517723517 - - type I inositol polyphosphate 5-phosphatase, putative [Ricinus communis]
11 Hb_001633_110 0.1519301638 - - PREDICTED: pentatricopeptide repeat-containing protein At3g26782, mitochondrial [Jatropha curcas]
12 Hb_000413_130 0.1522550949 - - PREDICTED: uncharacterized protein LOC105649409 [Jatropha curcas]
13 Hb_000078_130 0.1550752015 - - -
14 Hb_005914_230 0.1566992572 - - PREDICTED: pre-mRNA-processing factor 19 homolog 1 [Jatropha curcas]
15 Hb_006091_030 0.1568942589 desease resistance Gene Name: AAA PREDICTED: cell division control protein 48 homolog C-like isoform X1 [Jatropha curcas]
16 Hb_094437_070 0.1578310925 - - PREDICTED: uncharacterized protein LOC105630881 [Jatropha curcas]
17 Hb_001433_170 0.1588536774 - - PREDICTED: topless-related protein 3 isoform X1 [Jatropha curcas]
18 Hb_000984_180 0.1597979701 - - PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO3 isoform X1 [Jatropha curcas]
19 Hb_001431_070 0.1600725321 - - PREDICTED: large proline-rich protein bag6-like isoform X2 [Jatropha curcas]
20 Hb_003494_240 0.160975333 - - PREDICTED: uncharacterized protein LOC105644075 [Jatropha curcas]

Gene co-expression network

sample Hb_006076_030 Hb_006076_030 Hb_003734_130 Hb_003734_130 Hb_006076_030--Hb_003734_130 Hb_000027_270 Hb_000027_270 Hb_006076_030--Hb_000027_270 Hb_019613_020 Hb_019613_020 Hb_006076_030--Hb_019613_020 Hb_002377_050 Hb_002377_050 Hb_006076_030--Hb_002377_050 Hb_003581_140 Hb_003581_140 Hb_006076_030--Hb_003581_140 Hb_035524_030 Hb_035524_030 Hb_006076_030--Hb_035524_030 Hb_002675_190 Hb_002675_190 Hb_003734_130--Hb_002675_190 Hb_003777_220 Hb_003777_220 Hb_003734_130--Hb_003777_220 Hb_011316_030 Hb_011316_030 Hb_003734_130--Hb_011316_030 Hb_160818_010 Hb_160818_010 Hb_003734_130--Hb_160818_010 Hb_000573_040 Hb_000573_040 Hb_003734_130--Hb_000573_040 Hb_001439_180 Hb_001439_180 Hb_003734_130--Hb_001439_180 Hb_000700_090 Hb_000700_090 Hb_000027_270--Hb_000700_090 Hb_003494_240 Hb_003494_240 Hb_000027_270--Hb_003494_240 Hb_005488_070 Hb_005488_070 Hb_000027_270--Hb_005488_070 Hb_000078_130 Hb_000078_130 Hb_000027_270--Hb_000078_130 Hb_001454_060 Hb_001454_060 Hb_000027_270--Hb_001454_060 Hb_127979_010 Hb_127979_010 Hb_000027_270--Hb_127979_010 Hb_019613_020--Hb_035524_030 Hb_019613_020--Hb_127979_010 Hb_000085_280 Hb_000085_280 Hb_019613_020--Hb_000085_280 Hb_176022_020 Hb_176022_020 Hb_019613_020--Hb_176022_020 Hb_003404_030 Hb_003404_030 Hb_019613_020--Hb_003404_030 Hb_000057_060 Hb_000057_060 Hb_019613_020--Hb_000057_060 Hb_002169_010 Hb_002169_010 Hb_002377_050--Hb_002169_010 Hb_000176_140 Hb_000176_140 Hb_002377_050--Hb_000176_140 Hb_001776_080 Hb_001776_080 Hb_002377_050--Hb_001776_080 Hb_000491_080 Hb_000491_080 Hb_002377_050--Hb_000491_080 Hb_001433_170 Hb_001433_170 Hb_002377_050--Hb_001433_170 Hb_002377_050--Hb_127979_010 Hb_003581_140--Hb_000078_130 Hb_000608_120 Hb_000608_120 Hb_003581_140--Hb_000608_120 Hb_000490_030 Hb_000490_030 Hb_003581_140--Hb_000490_030 Hb_002039_010 Hb_002039_010 Hb_003581_140--Hb_002039_010 Hb_002890_340 Hb_002890_340 Hb_003581_140--Hb_002890_340 Hb_000418_100 Hb_000418_100 Hb_003581_140--Hb_000418_100 Hb_035524_030--Hb_000085_280 Hb_005288_120 Hb_005288_120 Hb_035524_030--Hb_005288_120 Hb_000671_100 Hb_000671_100 Hb_035524_030--Hb_000671_100 Hb_024714_030 Hb_024714_030 Hb_035524_030--Hb_024714_030 Hb_035524_030--Hb_127979_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.418436 0.152624 0.0941244 0.0568633 0.643792 0.778829
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.488612 0.109766 0.495212 0.177876 0

CAGE analysis