Hb_004645_060

Information

Type -
Description -
Location Contig4645: 58213-58872
Sequence    

Annotation

kegg
ID rcu:RCOM_0836610
description hypothetical protein
nr
ID XP_012068337.1
description PREDICTED: uncharacterized protein LOC105630948 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KYK5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15614 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004645_060 0.0 - - PREDICTED: uncharacterized protein LOC105630948 [Jatropha curcas]
2 Hb_002259_100 0.0049185189 - - PREDICTED: uncharacterized protein LOC105630152 isoform X1 [Jatropha curcas]
3 Hb_009323_010 0.0114132354 - - hypothetical protein POPTR_0008s03350g, partial [Populus trichocarpa]
4 Hb_001817_200 0.0119282729 - - hypothetical protein CISIN_1g037825mg [Citrus sinensis]
5 Hb_002391_260 0.0138076677 - - hypothetical protein RCOM_0017280 [Ricinus communis]
6 Hb_001571_070 0.0146439099 - - PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
7 Hb_007552_030 0.0147542019 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21064 [Jatropha curcas]
8 Hb_000413_090 0.0178243996 - - PREDICTED: transcription factor DYT1 [Jatropha curcas]
9 Hb_004126_020 0.0195702756 - - PREDICTED: uncharacterized protein LOC105649549 [Jatropha curcas]
10 Hb_001268_270 0.0231560192 - - protein binding protein, putative [Ricinus communis]
11 Hb_000691_040 0.0236068715 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
12 Hb_001322_060 0.0242035549 - - unnamed protein product [Vitis vinifera]
13 Hb_000003_800 0.0242211135 - - conserved hypothetical protein [Ricinus communis]
14 Hb_046615_050 0.0245580028 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
15 Hb_137288_010 0.0251728464 - - hypothetical protein B456_003G055000 [Gossypium raimondii]
16 Hb_003266_110 0.0261018938 - - ATP binding protein, putative [Ricinus communis]
17 Hb_012143_010 0.0279069165 - - PREDICTED: serine/threonine-protein kinase At5g01020 [Vitis vinifera]
18 Hb_001948_060 0.0289236062 - - PREDICTED: glutathione S-transferase DHAR3, chloroplastic [Jatropha curcas]
19 Hb_020479_010 0.0301639048 - - cinnamyl alcohol dehydrogenase [Pyrus pyrifolia]
20 Hb_001132_020 0.0308220387 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]

Gene co-expression network

sample Hb_004645_060 Hb_004645_060 Hb_002259_100 Hb_002259_100 Hb_004645_060--Hb_002259_100 Hb_009323_010 Hb_009323_010 Hb_004645_060--Hb_009323_010 Hb_001817_200 Hb_001817_200 Hb_004645_060--Hb_001817_200 Hb_002391_260 Hb_002391_260 Hb_004645_060--Hb_002391_260 Hb_001571_070 Hb_001571_070 Hb_004645_060--Hb_001571_070 Hb_007552_030 Hb_007552_030 Hb_004645_060--Hb_007552_030 Hb_002259_100--Hb_001817_200 Hb_002259_100--Hb_002391_260 Hb_002259_100--Hb_001571_070 Hb_000413_090 Hb_000413_090 Hb_002259_100--Hb_000413_090 Hb_002259_100--Hb_009323_010 Hb_009323_010--Hb_007552_030 Hb_004126_020 Hb_004126_020 Hb_009323_010--Hb_004126_020 Hb_001268_270 Hb_001268_270 Hb_009323_010--Hb_001268_270 Hb_000691_040 Hb_000691_040 Hb_009323_010--Hb_000691_040 Hb_046615_050 Hb_046615_050 Hb_009323_010--Hb_046615_050 Hb_001817_200--Hb_002391_260 Hb_001817_200--Hb_001571_070 Hb_001817_200--Hb_000413_090 Hb_001322_060 Hb_001322_060 Hb_001817_200--Hb_001322_060 Hb_002391_260--Hb_001571_070 Hb_002391_260--Hb_000413_090 Hb_002391_260--Hb_001322_060 Hb_000003_800 Hb_000003_800 Hb_002391_260--Hb_000003_800 Hb_001571_070--Hb_000413_090 Hb_001571_070--Hb_001322_060 Hb_001571_070--Hb_000003_800 Hb_007552_030--Hb_004126_020 Hb_007552_030--Hb_001268_270 Hb_007552_030--Hb_000691_040 Hb_007552_030--Hb_046615_050 Hb_012143_010 Hb_012143_010 Hb_007552_030--Hb_012143_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0899699 0.034891 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis