Hb_004126_020

Information

Type -
Description -
Location Contig4126: 38668-39862
Sequence    

Annotation

kegg
ID rcu:RCOM_1674520
description hypothetical protein
nr
ID XP_012091611.1
description PREDICTED: uncharacterized protein LOC105649549 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JDY7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21449 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004126_020 0.0 - - PREDICTED: uncharacterized protein LOC105649549 [Jatropha curcas]
2 Hb_001268_270 0.003586628 - - protein binding protein, putative [Ricinus communis]
3 Hb_000691_040 0.0040376115 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
4 Hb_007552_030 0.0048168219 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21064 [Jatropha curcas]
5 Hb_046615_050 0.0049890344 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
6 Hb_009323_010 0.008158016 - - hypothetical protein POPTR_0008s03350g, partial [Populus trichocarpa]
7 Hb_012143_010 0.0083391354 - - PREDICTED: serine/threonine-protein kinase At5g01020 [Vitis vinifera]
8 Hb_001132_020 0.0112554965 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
9 Hb_000381_060 0.0140826475 - - -
10 Hb_001019_110 0.0145156579 - - PREDICTED: cytochrome P450 734A1 [Jatropha curcas]
11 Hb_000221_010 0.0174688843 - - polyprotein [Oryza australiensis]
12 Hb_004645_060 0.0195702756 - - PREDICTED: uncharacterized protein LOC105630948 [Jatropha curcas]
13 Hb_002817_020 0.0216715818 - - -
14 Hb_002391_280 0.0220409904 - - PREDICTED: ammonium transporter 3 member 1-like [Jatropha curcas]
15 Hb_000008_100 0.0231225767 - - Cyclic nucleotide-gated channel 15 [Theobroma cacao]
16 Hb_002259_100 0.0244875595 - - PREDICTED: uncharacterized protein LOC105630152 isoform X1 [Jatropha curcas]
17 Hb_000334_100 0.0266953052 - - hypothetical protein JCGZ_16788 [Jatropha curcas]
18 Hb_000489_050 0.030204225 - - PREDICTED: uncharacterized protein LOC105643984 isoform X1 [Jatropha curcas]
19 Hb_001817_200 0.0314947316 - - hypothetical protein CISIN_1g037825mg [Citrus sinensis]
20 Hb_003667_030 0.0322946336 transcription factor TF Family: MIKC PREDICTED: agamous-like MADS-box protein AGL15 [Jatropha curcas]

Gene co-expression network

sample Hb_004126_020 Hb_004126_020 Hb_001268_270 Hb_001268_270 Hb_004126_020--Hb_001268_270 Hb_000691_040 Hb_000691_040 Hb_004126_020--Hb_000691_040 Hb_007552_030 Hb_007552_030 Hb_004126_020--Hb_007552_030 Hb_046615_050 Hb_046615_050 Hb_004126_020--Hb_046615_050 Hb_009323_010 Hb_009323_010 Hb_004126_020--Hb_009323_010 Hb_012143_010 Hb_012143_010 Hb_004126_020--Hb_012143_010 Hb_001268_270--Hb_000691_040 Hb_001268_270--Hb_046615_050 Hb_001268_270--Hb_012143_010 Hb_001132_020 Hb_001132_020 Hb_001268_270--Hb_001132_020 Hb_001268_270--Hb_007552_030 Hb_000691_040--Hb_046615_050 Hb_000691_040--Hb_012143_010 Hb_000691_040--Hb_001132_020 Hb_000691_040--Hb_007552_030 Hb_007552_030--Hb_009323_010 Hb_007552_030--Hb_046615_050 Hb_007552_030--Hb_012143_010 Hb_046615_050--Hb_012143_010 Hb_046615_050--Hb_001132_020 Hb_000381_060 Hb_000381_060 Hb_046615_050--Hb_000381_060 Hb_004645_060 Hb_004645_060 Hb_009323_010--Hb_004645_060 Hb_009323_010--Hb_001268_270 Hb_009323_010--Hb_000691_040 Hb_009323_010--Hb_046615_050 Hb_012143_010--Hb_001132_020 Hb_012143_010--Hb_000381_060 Hb_001019_110 Hb_001019_110 Hb_012143_010--Hb_001019_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0546289 0.0190943 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis