Hb_001132_020

Information

Type -
Description -
Location Contig1132: 28072-52303
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa022673mg
description hypothetical protein
nr
ID XP_007220718.1
description hypothetical protein PRUPE_ppa022673mg [Prunus persica]
swissprot
ID P0CT40
description Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-9 PE=3 SV=1
trembl
ID M5X787
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022673mg PE=4 SV=1
Gene Ontology
ID GO:0005488
description dna rna polymerases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001132_020 0.0 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
2 Hb_000381_060 0.0028274095 - - -
3 Hb_012143_010 0.0029165178 - - PREDICTED: serine/threonine-protein kinase At5g01020 [Vitis vinifera]
4 Hb_001019_110 0.0032604689 - - PREDICTED: cytochrome P450 734A1 [Jatropha curcas]
5 Hb_000221_010 0.006214096 - - polyprotein [Oryza australiensis]
6 Hb_046615_050 0.0062666625 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
7 Hb_000691_040 0.0072180715 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
8 Hb_001268_270 0.0076690445 - - protein binding protein, putative [Ricinus communis]
9 Hb_002817_020 0.0104175672 - - -
10 Hb_002391_280 0.0107870554 - - PREDICTED: ammonium transporter 3 member 1-like [Jatropha curcas]
11 Hb_004126_020 0.0112554965 - - PREDICTED: uncharacterized protein LOC105649549 [Jatropha curcas]
12 Hb_000008_100 0.0118688855 - - Cyclic nucleotide-gated channel 15 [Theobroma cacao]
13 Hb_000334_100 0.0154425347 - - hypothetical protein JCGZ_16788 [Jatropha curcas]
14 Hb_007552_030 0.0160718292 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21064 [Jatropha curcas]
15 Hb_000489_050 0.0189525334 - - PREDICTED: uncharacterized protein LOC105643984 isoform X1 [Jatropha curcas]
16 Hb_009323_010 0.0194125165 - - hypothetical protein POPTR_0008s03350g, partial [Populus trichocarpa]
17 Hb_003667_030 0.0210436682 transcription factor TF Family: MIKC PREDICTED: agamous-like MADS-box protein AGL15 [Jatropha curcas]
18 Hb_156853_010 0.0247396994 - - PREDICTED: vinorine synthase-like [Populus euphratica]
19 Hb_002151_140 0.0277856896 - - PREDICTED: lichenase-2-like [Pyrus x bretschneideri]
20 Hb_000784_050 0.0295153293 - - PREDICTED: auxin-induced protein X10A-like [Nelumbo nucifera]

Gene co-expression network

sample Hb_001132_020 Hb_001132_020 Hb_000381_060 Hb_000381_060 Hb_001132_020--Hb_000381_060 Hb_012143_010 Hb_012143_010 Hb_001132_020--Hb_012143_010 Hb_001019_110 Hb_001019_110 Hb_001132_020--Hb_001019_110 Hb_000221_010 Hb_000221_010 Hb_001132_020--Hb_000221_010 Hb_046615_050 Hb_046615_050 Hb_001132_020--Hb_046615_050 Hb_000691_040 Hb_000691_040 Hb_001132_020--Hb_000691_040 Hb_000381_060--Hb_001019_110 Hb_000381_060--Hb_000221_010 Hb_000381_060--Hb_012143_010 Hb_002817_020 Hb_002817_020 Hb_000381_060--Hb_002817_020 Hb_002391_280 Hb_002391_280 Hb_000381_060--Hb_002391_280 Hb_012143_010--Hb_046615_050 Hb_012143_010--Hb_000691_040 Hb_001268_270 Hb_001268_270 Hb_012143_010--Hb_001268_270 Hb_012143_010--Hb_001019_110 Hb_001019_110--Hb_000221_010 Hb_001019_110--Hb_002817_020 Hb_001019_110--Hb_002391_280 Hb_000221_010--Hb_002817_020 Hb_000221_010--Hb_002391_280 Hb_000008_100 Hb_000008_100 Hb_000221_010--Hb_000008_100 Hb_046615_050--Hb_000691_040 Hb_046615_050--Hb_001268_270 Hb_004126_020 Hb_004126_020 Hb_046615_050--Hb_004126_020 Hb_046615_050--Hb_000381_060 Hb_000691_040--Hb_001268_270 Hb_000691_040--Hb_004126_020 Hb_007552_030 Hb_007552_030 Hb_000691_040--Hb_007552_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.00821366 0.00270113 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis