Hb_001019_110

Information

Type -
Description -
Location Contig1019: 149927-152876
Sequence    

Annotation

kegg
ID rcu:RCOM_0220560
description cytochrome P450, putative (EC:1.3.3.9)
nr
ID XP_012078717.1
description PREDICTED: cytochrome P450 734A1 [Jatropha curcas]
swissprot
ID O48786
description Cytochrome P450 734A1 OS=Arabidopsis thaliana GN=CYP734A1 PE=2 SV=1
trembl
ID A0A067KBH8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13283 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 734a1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00927: 149957-151281 , PASA_asmbl_00928: 151291-151529
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001019_110 0.0 - - PREDICTED: cytochrome P450 734A1 [Jatropha curcas]
2 Hb_000381_060 0.0004330617 - - -
3 Hb_000221_010 0.0029536626 - - polyprotein [Oryza australiensis]
4 Hb_001132_020 0.0032604689 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
5 Hb_012143_010 0.0061769523 - - PREDICTED: serine/threonine-protein kinase At5g01020 [Vitis vinifera]
6 Hb_002817_020 0.0071572432 - - -
7 Hb_002391_280 0.0075267443 - - PREDICTED: ammonium transporter 3 member 1-like [Jatropha curcas]
8 Hb_000008_100 0.0086086155 - - Cyclic nucleotide-gated channel 15 [Theobroma cacao]
9 Hb_046615_050 0.0095270182 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
10 Hb_000691_040 0.0104783972 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
11 Hb_001268_270 0.0109293548 - - protein binding protein, putative [Ricinus communis]
12 Hb_000334_100 0.0121824341 - - hypothetical protein JCGZ_16788 [Jatropha curcas]
13 Hb_004126_020 0.0145156579 - - PREDICTED: uncharacterized protein LOC105649549 [Jatropha curcas]
14 Hb_000489_050 0.0156926498 - - PREDICTED: uncharacterized protein LOC105643984 isoform X1 [Jatropha curcas]
15 Hb_003667_030 0.017783938 transcription factor TF Family: MIKC PREDICTED: agamous-like MADS-box protein AGL15 [Jatropha curcas]
16 Hb_007552_030 0.0193317175 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21064 [Jatropha curcas]
17 Hb_009323_010 0.0226721669 - - hypothetical protein POPTR_0008s03350g, partial [Populus trichocarpa]
18 Hb_156853_010 0.0230487767 - - PREDICTED: vinorine synthase-like [Populus euphratica]
19 Hb_002151_140 0.0245265797 - - PREDICTED: lichenase-2-like [Pyrus x bretschneideri]
20 Hb_000784_050 0.0262564098 - - PREDICTED: auxin-induced protein X10A-like [Nelumbo nucifera]

Gene co-expression network

sample Hb_001019_110 Hb_001019_110 Hb_000381_060 Hb_000381_060 Hb_001019_110--Hb_000381_060 Hb_000221_010 Hb_000221_010 Hb_001019_110--Hb_000221_010 Hb_001132_020 Hb_001132_020 Hb_001019_110--Hb_001132_020 Hb_012143_010 Hb_012143_010 Hb_001019_110--Hb_012143_010 Hb_002817_020 Hb_002817_020 Hb_001019_110--Hb_002817_020 Hb_002391_280 Hb_002391_280 Hb_001019_110--Hb_002391_280 Hb_000381_060--Hb_001132_020 Hb_000381_060--Hb_000221_010 Hb_000381_060--Hb_012143_010 Hb_000381_060--Hb_002817_020 Hb_000381_060--Hb_002391_280 Hb_000221_010--Hb_002817_020 Hb_000221_010--Hb_002391_280 Hb_000008_100 Hb_000008_100 Hb_000221_010--Hb_000008_100 Hb_000221_010--Hb_001132_020 Hb_001132_020--Hb_012143_010 Hb_046615_050 Hb_046615_050 Hb_001132_020--Hb_046615_050 Hb_000691_040 Hb_000691_040 Hb_001132_020--Hb_000691_040 Hb_012143_010--Hb_046615_050 Hb_012143_010--Hb_000691_040 Hb_001268_270 Hb_001268_270 Hb_012143_010--Hb_001268_270 Hb_002817_020--Hb_002391_280 Hb_002817_020--Hb_000008_100 Hb_000334_100 Hb_000334_100 Hb_002817_020--Hb_000334_100 Hb_002391_280--Hb_000008_100 Hb_002391_280--Hb_000334_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.580753 0.18761 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis