Hb_002259_100

Information

Type -
Description -
Location Contig2259: 70828-81629
Sequence    

Annotation

kegg
ID rcu:RCOM_0612720
description hypothetical protein
nr
ID XP_012067266.1
description PREDICTED: uncharacterized protein LOC105630152 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LDI8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08444 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002259_100 0.0 - - PREDICTED: uncharacterized protein LOC105630152 isoform X1 [Jatropha curcas]
2 Hb_004645_060 0.0049185189 - - PREDICTED: uncharacterized protein LOC105630948 [Jatropha curcas]
3 Hb_001817_200 0.0070099609 - - hypothetical protein CISIN_1g037825mg [Citrus sinensis]
4 Hb_002391_260 0.0088894518 - - hypothetical protein RCOM_0017280 [Ricinus communis]
5 Hb_001571_070 0.0097257423 - - PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
6 Hb_000413_090 0.0129064457 - - PREDICTED: transcription factor DYT1 [Jatropha curcas]
7 Hb_009323_010 0.0163312791 - - hypothetical protein POPTR_0008s03350g, partial [Populus trichocarpa]
8 Hb_001322_060 0.0192861735 - - unnamed protein product [Vitis vinifera]
9 Hb_000003_800 0.019303734 - - conserved hypothetical protein [Ricinus communis]
10 Hb_007552_030 0.0196719776 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21064 [Jatropha curcas]
11 Hb_137288_010 0.0202555685 - - hypothetical protein B456_003G055000 [Gossypium raimondii]
12 Hb_003266_110 0.0211847192 - - ATP binding protein, putative [Ricinus communis]
13 Hb_001948_060 0.0240067695 - - PREDICTED: glutathione S-transferase DHAR3, chloroplastic [Jatropha curcas]
14 Hb_004126_020 0.0244875595 - - PREDICTED: uncharacterized protein LOC105649549 [Jatropha curcas]
15 Hb_020479_010 0.0252472281 - - cinnamyl alcohol dehydrogenase [Pyrus pyrifolia]
16 Hb_187418_010 0.0276955426 - - PREDICTED: TMV resistance protein N-like, partial [Citrus sinensis]
17 Hb_001268_270 0.0280728549 - - protein binding protein, putative [Ricinus communis]
18 Hb_000691_040 0.0285236458 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
19 Hb_046615_050 0.0294746439 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
20 Hb_001504_200 0.0323515422 - - Beta-3 adrenergic receptor, putative [Theobroma cacao]

Gene co-expression network

sample Hb_002259_100 Hb_002259_100 Hb_004645_060 Hb_004645_060 Hb_002259_100--Hb_004645_060 Hb_001817_200 Hb_001817_200 Hb_002259_100--Hb_001817_200 Hb_002391_260 Hb_002391_260 Hb_002259_100--Hb_002391_260 Hb_001571_070 Hb_001571_070 Hb_002259_100--Hb_001571_070 Hb_000413_090 Hb_000413_090 Hb_002259_100--Hb_000413_090 Hb_009323_010 Hb_009323_010 Hb_002259_100--Hb_009323_010 Hb_004645_060--Hb_009323_010 Hb_004645_060--Hb_001817_200 Hb_004645_060--Hb_002391_260 Hb_004645_060--Hb_001571_070 Hb_007552_030 Hb_007552_030 Hb_004645_060--Hb_007552_030 Hb_001817_200--Hb_002391_260 Hb_001817_200--Hb_001571_070 Hb_001817_200--Hb_000413_090 Hb_001322_060 Hb_001322_060 Hb_001817_200--Hb_001322_060 Hb_002391_260--Hb_001571_070 Hb_002391_260--Hb_000413_090 Hb_002391_260--Hb_001322_060 Hb_000003_800 Hb_000003_800 Hb_002391_260--Hb_000003_800 Hb_001571_070--Hb_000413_090 Hb_001571_070--Hb_001322_060 Hb_001571_070--Hb_000003_800 Hb_000413_090--Hb_001322_060 Hb_000413_090--Hb_000003_800 Hb_137288_010 Hb_137288_010 Hb_000413_090--Hb_137288_010 Hb_009323_010--Hb_007552_030 Hb_004126_020 Hb_004126_020 Hb_009323_010--Hb_004126_020 Hb_001268_270 Hb_001268_270 Hb_009323_010--Hb_001268_270 Hb_000691_040 Hb_000691_040 Hb_009323_010--Hb_000691_040 Hb_046615_050 Hb_046615_050 Hb_009323_010--Hb_046615_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.146311 0.0582199 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis