Hb_002631_060

Information

Type -
Description -
Location Contig2631: 49132-51237
Sequence    

Annotation

kegg
ID rcu:RCOM_1573890
description hypothetical protein
nr
ID XP_012087338.1
description PREDICTED: uncharacterized protein LOC105646151 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JYH3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22590 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27447: 49136-51341 , PASA_asmbl_27448: 49136-51335
cDNA
(Sanger)
(ID:Location)		 028_G22.ab1: 49426-51341

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002631_060 0.0 - - PREDICTED: uncharacterized protein LOC105646151 [Jatropha curcas]
2 Hb_010883_090 0.0639310144 - - PREDICTED: uncharacterized protein LOC105638888 isoform X1 [Jatropha curcas]
3 Hb_004907_110 0.0695469713 - - PREDICTED: BTB/POZ and MATH domain-containing protein 3 isoform X1 [Jatropha curcas]
4 Hb_003376_350 0.0731812734 - - PREDICTED: CASP-like protein 5A1 isoform X1 [Jatropha curcas]
5 Hb_007416_320 0.0733613189 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000260_270 0.0738788007 - - zinc finger protein, putative [Ricinus communis]
7 Hb_000395_190 0.082447491 - - PREDICTED: F-box/LRR-repeat protein 7-like [Jatropha curcas]
8 Hb_000696_040 0.0828073198 - - protein phosphatase 2c, putative [Ricinus communis]
9 Hb_001892_020 0.0833208233 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
10 Hb_010128_080 0.0838644605 - - PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like isoform X1 [Jatropha curcas]
11 Hb_004738_100 0.0839767479 - - PREDICTED: 14-3-3-like protein D-like isoform X1 [Citrus sinensis]
12 Hb_000805_020 0.0850359312 - - pumilio/Puf RNA-binding domain-containing family protein [Populus trichocarpa]
13 Hb_007532_030 0.0867388807 - - PREDICTED: F-box/kelch-repeat protein At1g30090 [Jatropha curcas]
14 Hb_000061_460 0.0886684674 transcription factor TF Family: SNF2 ATP binding protein, putative [Ricinus communis]
15 Hb_000926_330 0.089284723 transcription factor TF Family: ERF ethylene-responsive transcription factor 3-like [Jatropha curcas]
16 Hb_005731_130 0.0893942427 - - PREDICTED: probable metal-nicotianamine transporter YSL6 [Jatropha curcas]
17 Hb_003687_240 0.0898044289 - - PREDICTED: cryptochrome-1 [Jatropha curcas]
18 Hb_005618_170 0.0907483879 - - PREDICTED: protein transport protein SEC23 [Jatropha curcas]
19 Hb_007441_230 0.0955863409 - - PREDICTED: probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase [Jatropha curcas]
20 Hb_000291_110 0.0960826216 - - eukaryotic translation initiation factor [Hevea brasiliensis]

Gene co-expression network

sample Hb_002631_060 Hb_002631_060 Hb_010883_090 Hb_010883_090 Hb_002631_060--Hb_010883_090 Hb_004907_110 Hb_004907_110 Hb_002631_060--Hb_004907_110 Hb_003376_350 Hb_003376_350 Hb_002631_060--Hb_003376_350 Hb_007416_320 Hb_007416_320 Hb_002631_060--Hb_007416_320 Hb_000260_270 Hb_000260_270 Hb_002631_060--Hb_000260_270 Hb_000395_190 Hb_000395_190 Hb_002631_060--Hb_000395_190 Hb_003994_060 Hb_003994_060 Hb_010883_090--Hb_003994_060 Hb_000805_020 Hb_000805_020 Hb_010883_090--Hb_000805_020 Hb_003687_240 Hb_003687_240 Hb_010883_090--Hb_003687_240 Hb_001892_020 Hb_001892_020 Hb_010883_090--Hb_001892_020 Hb_010883_090--Hb_004907_110 Hb_004907_110--Hb_000805_020 Hb_007532_030 Hb_007532_030 Hb_004907_110--Hb_007532_030 Hb_008725_260 Hb_008725_260 Hb_004907_110--Hb_008725_260 Hb_031527_040 Hb_031527_040 Hb_004907_110--Hb_031527_040 Hb_000876_070 Hb_000876_070 Hb_004907_110--Hb_000876_070 Hb_003376_350--Hb_004907_110 Hb_000926_330 Hb_000926_330 Hb_003376_350--Hb_000926_330 Hb_004994_140 Hb_004994_140 Hb_003376_350--Hb_004994_140 Hb_000189_560 Hb_000189_560 Hb_003376_350--Hb_000189_560 Hb_003376_350--Hb_007532_030 Hb_005618_170 Hb_005618_170 Hb_007416_320--Hb_005618_170 Hb_001633_210 Hb_001633_210 Hb_007416_320--Hb_001633_210 Hb_000058_060 Hb_000058_060 Hb_007416_320--Hb_000058_060 Hb_000062_220 Hb_000062_220 Hb_007416_320--Hb_000062_220 Hb_007416_320--Hb_000876_070 Hb_000120_470 Hb_000120_470 Hb_007416_320--Hb_000120_470 Hb_000260_270--Hb_000395_190 Hb_005731_130 Hb_005731_130 Hb_000260_270--Hb_005731_130 Hb_011218_040 Hb_011218_040 Hb_000260_270--Hb_011218_040 Hb_004994_220 Hb_004994_220 Hb_000260_270--Hb_004994_220 Hb_000329_470 Hb_000329_470 Hb_000260_270--Hb_000329_470 Hb_010128_080 Hb_010128_080 Hb_000395_190--Hb_010128_080 Hb_000395_190--Hb_005731_130 Hb_089032_040 Hb_089032_040 Hb_000395_190--Hb_089032_040 Hb_002078_130 Hb_002078_130 Hb_000395_190--Hb_002078_130 Hb_000099_080 Hb_000099_080 Hb_000395_190--Hb_000099_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
26.93 32.3364 8.87717 25.1822 28.6286 27.6936
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
36.6182 42.4279 50.5736 30.9771 11.0635

CAGE analysis