Hb_002307_070

Information

Type -
Description -
Location Contig2307: 39966-40575
Sequence    

Annotation

kegg
ID crb:CARUB_v10006855mg
description hypothetical protein
nr
ID KDP31616.1
description hypothetical protein JCGZ_14841 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K5W5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14841 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002307_070 0.0 - - hypothetical protein JCGZ_14841 [Jatropha curcas]
2 Hb_002490_050 0.2783362166 - - Os02g0182500, partial [Oryza sativa Japonica Group]
3 Hb_054936_010 0.2907588474 - - PREDICTED: uncharacterized protein LOC105793230 [Gossypium raimondii]
4 Hb_007904_190 0.2921437362 - - -
5 Hb_005671_030 0.2987408473 - - -
6 Hb_176022_010 0.3025088835 - - -
7 Hb_066620_010 0.3038145966 - - hypothetical protein JCGZ_08269 [Jatropha curcas]
8 Hb_044767_010 0.3038154916 - - -
9 Hb_001887_030 0.3038432042 - - -
10 Hb_012587_010 0.3039333078 - - -
11 Hb_003985_020 0.304062727 - - -
12 Hb_003017_010 0.3041783572 - - PREDICTED: uncharacterized protein LOC104878882 [Vitis vinifera]
13 Hb_002257_070 0.304225372 - - hypothetical protein, partial [Pseudomonas fluorescens]
14 Hb_056305_010 0.3042424546 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
15 Hb_008891_020 0.3042465082 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103343662 [Prunus mume]
16 Hb_000934_220 0.3047073745 - - PREDICTED: uncharacterized protein LOC104890722 [Beta vulgaris subsp. vulgaris]
17 Hb_000188_090 0.3051745091 - - JHL22C18.10 [Jatropha curcas]
18 Hb_010222_010 0.3054853857 - - -
19 Hb_187661_010 0.3102924248 - - PREDICTED: thylakoidal processing peptidase 1, chloroplastic-like [Jatropha curcas]
20 Hb_048610_010 0.3103785548 - - -

Gene co-expression network

sample Hb_002307_070 Hb_002307_070 Hb_002490_050 Hb_002490_050 Hb_002307_070--Hb_002490_050 Hb_054936_010 Hb_054936_010 Hb_002307_070--Hb_054936_010 Hb_007904_190 Hb_007904_190 Hb_002307_070--Hb_007904_190 Hb_005671_030 Hb_005671_030 Hb_002307_070--Hb_005671_030 Hb_176022_010 Hb_176022_010 Hb_002307_070--Hb_176022_010 Hb_066620_010 Hb_066620_010 Hb_002307_070--Hb_066620_010 Hb_002490_050--Hb_176022_010 Hb_038675_010 Hb_038675_010 Hb_002490_050--Hb_038675_010 Hb_059069_010 Hb_059069_010 Hb_002490_050--Hb_059069_010 Hb_000195_050 Hb_000195_050 Hb_002490_050--Hb_000195_050 Hb_011360_100 Hb_011360_100 Hb_002490_050--Hb_011360_100 Hb_009265_020 Hb_009265_020 Hb_002490_050--Hb_009265_020 Hb_153461_010 Hb_153461_010 Hb_054936_010--Hb_153461_010 Hb_184212_010 Hb_184212_010 Hb_054936_010--Hb_184212_010 Hb_013925_010 Hb_013925_010 Hb_054936_010--Hb_013925_010 Hb_079993_010 Hb_079993_010 Hb_054936_010--Hb_079993_010 Hb_000922_130 Hb_000922_130 Hb_054936_010--Hb_000922_130 Hb_000014_130 Hb_000014_130 Hb_007904_190--Hb_000014_130 Hb_002837_090 Hb_002837_090 Hb_007904_190--Hb_002837_090 Hb_004534_020 Hb_004534_020 Hb_007904_190--Hb_004534_020 Hb_165078_010 Hb_165078_010 Hb_007904_190--Hb_165078_010 Hb_003609_010 Hb_003609_010 Hb_007904_190--Hb_003609_010 Hb_024828_040 Hb_024828_040 Hb_007904_190--Hb_024828_040 Hb_187661_010 Hb_187661_010 Hb_005671_030--Hb_187661_010 Hb_008891_020 Hb_008891_020 Hb_005671_030--Hb_008891_020 Hb_056305_010 Hb_056305_010 Hb_005671_030--Hb_056305_010 Hb_002257_070 Hb_002257_070 Hb_005671_030--Hb_002257_070 Hb_003017_010 Hb_003017_010 Hb_005671_030--Hb_003017_010 Hb_003985_020 Hb_003985_020 Hb_005671_030--Hb_003985_020 Hb_176022_010--Hb_011360_100 Hb_176022_010--Hb_059069_010 Hb_176022_010--Hb_038675_010 Hb_004458_050 Hb_004458_050 Hb_176022_010--Hb_004458_050 Hb_005741_010 Hb_005741_010 Hb_176022_010--Hb_005741_010 Hb_044767_010 Hb_044767_010 Hb_066620_010--Hb_044767_010 Hb_001887_030 Hb_001887_030 Hb_066620_010--Hb_001887_030 Hb_012587_010 Hb_012587_010 Hb_066620_010--Hb_012587_010 Hb_066620_010--Hb_003985_020 Hb_066620_010--Hb_003017_010 Hb_066620_010--Hb_002257_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.6758 0.249003 0 0 0 4.43002
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 1.14071 0.512442 0 0

CAGE analysis