Hb_000697_030

Information

Type -
Description -
Location Contig697: 42523-43060
Sequence    

Annotation

kegg
ID pxb:103935627
description 2-alkenal reductase (NADP(+)-dependent)-like
nr
ID XP_009343692.1
description PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like [Pyrus x bretschneideri]
swissprot
ID -
description -
trembl
ID A0A0D2S8L7
description Gossypium raimondii chromosome 5, whole genome shotgun sequence OS=Gossypium raimondii GN=B456_005G007100 PE=4 SV=1
Gene Ontology
ID GO:0008270
description 2-alkenal reductase (nadp(+)-dependent)-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000697_030 0.0 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like [Pyrus x bretschneideri]
2 Hb_000069_220 0.0354972254 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF023 [Jatropha curcas]
3 Hb_003573_030 0.0387181892 - - PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
4 Hb_000530_040 0.0401131586 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG2 isoform X1 [Jatropha curcas]
5 Hb_001424_010 0.0478561639 - - serine/threonine protein kinase, putative [Ricinus communis]
6 Hb_004411_010 0.0488128137 - - PREDICTED: NADP-dependent alkenal double bond reductase P2-like isoform X5 [Gossypium raimondii]
7 Hb_001975_120 0.0494385992 - - chlorophyll a/b binding protein type II [Glycine max]
8 Hb_016371_010 0.0516401291 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
9 Hb_000281_120 0.0664028233 - - protein binding protein, putative [Ricinus communis]
10 Hb_003651_030 0.0676150156 - - lyase, putative [Ricinus communis]
11 Hb_179129_010 0.0706881005 - - hypothetical protein POPTR_0018s10470g [Populus trichocarpa]
12 Hb_078954_030 0.0715201176 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000069_440 0.0727434562 - - PREDICTED: uncharacterized protein LOC105642861 [Jatropha curcas]
14 Hb_000210_030 0.0749111601 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP6 [Jatropha curcas]
15 Hb_003038_230 0.0754020719 - - PREDICTED: mannan endo-1,4-beta-mannosidase 7 [Jatropha curcas]
16 Hb_000608_270 0.0769972184 - - conserved hypothetical protein [Ricinus communis]
17 Hb_005345_020 0.0775731738 - - Root phototropism protein, putative [Ricinus communis]
18 Hb_001675_090 0.0781128691 - - Photosystem I reaction center subunit VI, chloroplast precursor, putative [Ricinus communis]
19 Hb_009476_030 0.0784973201 - - fatty acid desaturase [Manihot esculenta]
20 Hb_007853_030 0.0815443415 - - structural molecule, putative [Ricinus communis]

Gene co-expression network

sample Hb_000697_030 Hb_000697_030 Hb_000069_220 Hb_000069_220 Hb_000697_030--Hb_000069_220 Hb_003573_030 Hb_003573_030 Hb_000697_030--Hb_003573_030 Hb_000530_040 Hb_000530_040 Hb_000697_030--Hb_000530_040 Hb_001424_010 Hb_001424_010 Hb_000697_030--Hb_001424_010 Hb_004411_010 Hb_004411_010 Hb_000697_030--Hb_004411_010 Hb_001975_120 Hb_001975_120 Hb_000697_030--Hb_001975_120 Hb_000069_220--Hb_003573_030 Hb_000069_220--Hb_004411_010 Hb_007853_030 Hb_007853_030 Hb_000069_220--Hb_007853_030 Hb_000069_220--Hb_000530_040 Hb_000210_030 Hb_000210_030 Hb_000069_220--Hb_000210_030 Hb_000281_120 Hb_000281_120 Hb_003573_030--Hb_000281_120 Hb_003651_030 Hb_003651_030 Hb_003573_030--Hb_003651_030 Hb_003573_030--Hb_000210_030 Hb_003573_030--Hb_000530_040 Hb_000530_040--Hb_001424_010 Hb_000530_040--Hb_001975_120 Hb_078954_030 Hb_078954_030 Hb_000530_040--Hb_078954_030 Hb_001424_010--Hb_078954_030 Hb_179129_010 Hb_179129_010 Hb_001424_010--Hb_179129_010 Hb_016371_010 Hb_016371_010 Hb_001424_010--Hb_016371_010 Hb_000025_700 Hb_000025_700 Hb_001424_010--Hb_000025_700 Hb_000069_440 Hb_000069_440 Hb_004411_010--Hb_000069_440 Hb_004411_010--Hb_016371_010 Hb_000282_020 Hb_000282_020 Hb_004411_010--Hb_000282_020 Hb_004411_010--Hb_007853_030 Hb_005345_020 Hb_005345_020 Hb_001975_120--Hb_005345_020 Hb_001975_120--Hb_003573_030 Hb_009476_030 Hb_009476_030 Hb_001975_120--Hb_009476_030 Hb_001975_120--Hb_001424_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.97771 41.0907 13.0971 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 34.0571

CAGE analysis