Hb_000599_350

Information

Type -
Description -
Location Contig599: 333354-339231
Sequence    

Annotation

kegg
ID rcu:RCOM_0259060
description hypothetical protein
nr
ID XP_012085275.1
description PREDICTED: glutathione gamma-glutamylcysteinyltransferase 1 [Jatropha curcas]
swissprot
ID Q2TSC7
description Glutathione gamma-glutamylcysteinyltransferase 1 OS=Lotus japonicus GN=PCS1 PE=2 SV=1
trembl
ID A0A067JRB8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17659 PE=4 SV=1
Gene Ontology
ID GO:0016756
description glutathione gamma-glutamylcysteinyltransferase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50506: 334187-339139
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000599_350 0.0 - - PREDICTED: glutathione gamma-glutamylcysteinyltransferase 1 [Jatropha curcas]
2 Hb_032208_060 0.1074978669 - - PREDICTED: constitutive photomorphogenesis protein 10 isoform X2 [Populus euphratica]
3 Hb_003687_240 0.1117976292 - - PREDICTED: cryptochrome-1 [Jatropha curcas]
4 Hb_011953_020 0.1136862876 - - PREDICTED: ORM1-like protein 1 [Jatropha curcas]
5 Hb_000340_390 0.1164942977 - - PREDICTED: autophagy-related protein 18g [Jatropha curcas]
6 Hb_012114_040 0.1196995832 - - DNA binding protein, putative [Ricinus communis]
7 Hb_007181_070 0.1228551845 - - PREDICTED: alpha-galactosidase-like [Jatropha curcas]
8 Hb_021596_040 0.1247566939 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
9 Hb_001663_050 0.1273406475 - - PREDICTED: GPN-loop GTPase 3 [Jatropha curcas]
10 Hb_000856_260 0.1296862231 transcription factor TF Family: HB hypothetical protein POPTR_0015s07640g [Populus trichocarpa]
11 Hb_002835_100 0.1310109604 - - PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 6-like [Jatropha curcas]
12 Hb_002842_020 0.1314129154 - - Prolactin regulatory element-binding protein, putative [Ricinus communis]
13 Hb_093458_050 0.1322619981 - - glutathione reductase [Hevea brasiliensis]
14 Hb_001481_140 0.1342528586 - - PREDICTED: putative dual specificity protein phosphatase DSP8 [Jatropha curcas]
15 Hb_155764_010 0.1356028984 - - -
16 Hb_000189_640 0.1357265823 - - PREDICTED: probable RNA helicase SDE3 [Jatropha curcas]
17 Hb_003551_050 0.1357545547 - - PREDICTED: mitochondrial fission 1 protein A [Jatropha curcas]
18 Hb_116898_010 0.1375947123 - - PREDICTED: uncharacterized protein LOC105639569 isoform X2 [Jatropha curcas]
19 Hb_004705_120 0.1399653962 - - ATP binding protein, putative [Ricinus communis]
20 Hb_000789_220 0.1405038724 - - phosphofructokinase [Hevea brasiliensis]

Gene co-expression network

sample Hb_000599_350 Hb_000599_350 Hb_032208_060 Hb_032208_060 Hb_000599_350--Hb_032208_060 Hb_003687_240 Hb_003687_240 Hb_000599_350--Hb_003687_240 Hb_011953_020 Hb_011953_020 Hb_000599_350--Hb_011953_020 Hb_000340_390 Hb_000340_390 Hb_000599_350--Hb_000340_390 Hb_012114_040 Hb_012114_040 Hb_000599_350--Hb_012114_040 Hb_007181_070 Hb_007181_070 Hb_000599_350--Hb_007181_070 Hb_001663_050 Hb_001663_050 Hb_032208_060--Hb_001663_050 Hb_032208_060--Hb_012114_040 Hb_028515_010 Hb_028515_010 Hb_032208_060--Hb_028515_010 Hb_005568_120 Hb_005568_120 Hb_032208_060--Hb_005568_120 Hb_001481_140 Hb_001481_140 Hb_032208_060--Hb_001481_140 Hb_005883_100 Hb_005883_100 Hb_032208_060--Hb_005883_100 Hb_010883_090 Hb_010883_090 Hb_003687_240--Hb_010883_090 Hb_002631_060 Hb_002631_060 Hb_003687_240--Hb_002631_060 Hb_000805_020 Hb_000805_020 Hb_003687_240--Hb_000805_020 Hb_007747_200 Hb_007747_200 Hb_003687_240--Hb_007747_200 Hb_000696_040 Hb_000696_040 Hb_003687_240--Hb_000696_040 Hb_021596_040 Hb_021596_040 Hb_003687_240--Hb_021596_040 Hb_002005_020 Hb_002005_020 Hb_011953_020--Hb_002005_020 Hb_093458_050 Hb_093458_050 Hb_011953_020--Hb_093458_050 Hb_029866_020 Hb_029866_020 Hb_011953_020--Hb_029866_020 Hb_003551_050 Hb_003551_050 Hb_011953_020--Hb_003551_050 Hb_001519_050 Hb_001519_050 Hb_011953_020--Hb_001519_050 Hb_001519_030 Hb_001519_030 Hb_011953_020--Hb_001519_030 Hb_000367_060 Hb_000367_060 Hb_000340_390--Hb_000367_060 Hb_001454_190 Hb_001454_190 Hb_000340_390--Hb_001454_190 Hb_000340_390--Hb_003687_240 Hb_001959_190 Hb_001959_190 Hb_000340_390--Hb_001959_190 Hb_004607_050 Hb_004607_050 Hb_000340_390--Hb_004607_050 Hb_001811_030 Hb_001811_030 Hb_000340_390--Hb_001811_030 Hb_012114_040--Hb_001663_050 Hb_012114_040--Hb_005568_120 Hb_155764_010 Hb_155764_010 Hb_012114_040--Hb_155764_010 Hb_012114_040--Hb_001519_050 Hb_002061_040 Hb_002061_040 Hb_012114_040--Hb_002061_040 Hb_007181_070--Hb_093458_050 Hb_007181_070--Hb_011953_020 Hb_000363_200 Hb_000363_200 Hb_007181_070--Hb_000363_200 Hb_005614_050 Hb_005614_050 Hb_007181_070--Hb_005614_050 Hb_010560_040 Hb_010560_040 Hb_007181_070--Hb_010560_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.98625 6.55825 2.19944 9.19478 6.42659 10.5648
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.3335 19.6331 30.6174 19.6036 3.20223

CAGE analysis