Hb_000143_010

Information

Type -
Description -
Location Contig143: 25804-26049
Sequence    

Annotation

kegg
ID tcc:TCM_034761
description hypothetical protein
nr
ID KDP41663.1
description hypothetical protein JCGZ_16070 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L375
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16070 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000143_010 0.0 - - hypothetical protein JCGZ_16070 [Jatropha curcas]
2 Hb_073973_050 0.0914277345 transcription factor TF Family: GRAS PREDICTED: nodulation-signaling pathway 2 protein [Jatropha curcas]
3 Hb_090894_010 0.0946188632 - - PREDICTED: uncharacterized protein LOC105649214 [Jatropha curcas]
4 Hb_001948_020 0.0953976578 - - -
5 Hb_007845_020 0.0965621014 - - PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
6 Hb_036291_010 0.0983477051 - - PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
7 Hb_000315_110 0.0988033675 - - PREDICTED: gibberellin 3-beta-dioxygenase 1-like [Jatropha curcas]
8 Hb_001546_090 0.1025774871 transcription factor TF Family: MYB PREDICTED: transcription factor MYB114-like [Jatropha curcas]
9 Hb_004057_050 0.1034141608 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
10 Hb_000008_010 0.1084097556 - - PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
11 Hb_001266_110 0.1093533726 - - conserved hypothetical protein [Ricinus communis]
12 Hb_003334_020 0.1104668847 - - hypothetical protein CISIN_1g041546mg [Citrus sinensis]
13 Hb_019392_010 0.117747693 - - PREDICTED: LOW QUALITY PROTEIN: probable S-adenosylmethionine-dependent methyltransferase At5g38100 [Jatropha curcas]
14 Hb_000086_710 0.1192784881 - - PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Jatropha curcas]
15 Hb_033865_020 0.1197094369 - - -
16 Hb_001266_090 0.120065851 - - -
17 Hb_001414_080 0.1203687901 - - PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g38100 [Jatropha curcas]
18 Hb_000699_060 0.1207758902 - - hypothetical protein POPTR_0019s03180g [Populus trichocarpa]
19 Hb_005066_010 0.1221817159 - - FAD-binding domain-containing family protein [Populus trichocarpa]
20 Hb_109163_010 0.123943051 - - polyphenol oxidase [Hevea brasiliensis]

Gene co-expression network

sample Hb_000143_010 Hb_000143_010 Hb_073973_050 Hb_073973_050 Hb_000143_010--Hb_073973_050 Hb_090894_010 Hb_090894_010 Hb_000143_010--Hb_090894_010 Hb_001948_020 Hb_001948_020 Hb_000143_010--Hb_001948_020 Hb_007845_020 Hb_007845_020 Hb_000143_010--Hb_007845_020 Hb_036291_010 Hb_036291_010 Hb_000143_010--Hb_036291_010 Hb_000315_110 Hb_000315_110 Hb_000143_010--Hb_000315_110 Hb_073973_050--Hb_090894_010 Hb_073973_050--Hb_007845_020 Hb_073973_050--Hb_000315_110 Hb_073973_050--Hb_001948_020 Hb_073973_050--Hb_036291_010 Hb_000008_010 Hb_000008_010 Hb_073973_050--Hb_000008_010 Hb_090894_010--Hb_007845_020 Hb_090894_010--Hb_000315_110 Hb_090894_010--Hb_001948_020 Hb_090894_010--Hb_036291_010 Hb_001546_090 Hb_001546_090 Hb_090894_010--Hb_001546_090 Hb_001948_020--Hb_001546_090 Hb_001948_020--Hb_036291_010 Hb_001948_020--Hb_007845_020 Hb_033865_020 Hb_033865_020 Hb_001948_020--Hb_033865_020 Hb_007845_020--Hb_000315_110 Hb_007845_020--Hb_036291_010 Hb_007845_020--Hb_000008_010 Hb_036291_010--Hb_001546_090 Hb_001266_110 Hb_001266_110 Hb_036291_010--Hb_001266_110 Hb_000315_110--Hb_000008_010 Hb_001414_080 Hb_001414_080 Hb_000315_110--Hb_001414_080 Hb_001266_090 Hb_001266_090 Hb_000315_110--Hb_001266_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 2.54515 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 1.97661 115.135 0

CAGE analysis