Hb_000035_430

Information

Type -
Description -
Location Contig35: 417500-418411
Sequence    

Annotation

kegg
ID rcu:RCOM_0920290
description lipid binding protein, putative
nr
ID XP_012076380.1
description PREDICTED: protein ENHANCED DISEASE RESISTANCE 2-like [Jatropha curcas]
swissprot
ID F4JSE7
description Protein ENHANCED DISEASE RESISTANCE 2 OS=Arabidopsis thaliana GN=EDR2 PE=2 SV=1
trembl
ID A0A067KMG3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07051 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 033_G02.ab1: 417669-418419

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000035_430 0.0 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2-like [Jatropha curcas]
2 Hb_000191_020 0.0947102317 - - conserved hypothetical protein [Ricinus communis]
3 Hb_007140_020 0.1001414152 - - hypothetical protein CICLE_v10008419mg [Citrus clementina]
4 Hb_001687_040 0.1195429305 - - actin-depolymerizing factor [Hevea brasiliensis]
5 Hb_001604_030 0.1206151593 - - ubiquitin-conjugating enzyme E2 35-like [Cucumis sativus]
6 Hb_000027_150 0.1278512298 - - mitochondrial carrier protein, putative [Ricinus communis]
7 Hb_000012_130 0.1284094387 - - PREDICTED: uncharacterized protein LOC100807540 isoform X2 [Glycine max]
8 Hb_000384_130 0.1312071054 - - uridylate kinase plant, putative [Ricinus communis]
9 Hb_000046_260 0.13315135 - - acyl carrier protein, putative [Ricinus communis]
10 Hb_024714_060 0.1336127096 - - PREDICTED: thiamine pyrophosphokinase 1 isoform X1 [Jatropha curcas]
11 Hb_000907_090 0.1406605416 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
12 Hb_089100_020 0.1421231315 - - PREDICTED: cyclin-A1-1 [Jatropha curcas]
13 Hb_006573_220 0.1457481365 - - PREDICTED: trafficking protein particle complex subunit 1 [Jatropha curcas]
14 Hb_000922_170 0.1457874106 - - PREDICTED: uncharacterized protein LOC105640383 [Jatropha curcas]
15 Hb_001006_180 0.1493705407 - - PREDICTED: endonuclease V-like [Jatropha curcas]
16 Hb_002603_150 0.1494167762 - - PREDICTED: protein yippee-like [Jatropha curcas]
17 Hb_002234_070 0.1511770197 - - PREDICTED: polynucleotide 5'-hydroxyl-kinase nol9 isoform X1 [Jatropha curcas]
18 Hb_007594_120 0.1513001799 transcription factor TF Family: MIKC MADS-box transcription factor 2 [Hevea brasiliensis]
19 Hb_002759_230 0.1518520213 - - PREDICTED: vacuolar protein sorting-associated protein 25 [Jatropha curcas]
20 Hb_000012_100 0.1530589798 - - UPF0587 protein C1orf123 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_000035_430 Hb_000035_430 Hb_000191_020 Hb_000191_020 Hb_000035_430--Hb_000191_020 Hb_007140_020 Hb_007140_020 Hb_000035_430--Hb_007140_020 Hb_001687_040 Hb_001687_040 Hb_000035_430--Hb_001687_040 Hb_001604_030 Hb_001604_030 Hb_000035_430--Hb_001604_030 Hb_000027_150 Hb_000027_150 Hb_000035_430--Hb_000027_150 Hb_000012_130 Hb_000012_130 Hb_000035_430--Hb_000012_130 Hb_089100_020 Hb_089100_020 Hb_000191_020--Hb_089100_020 Hb_024714_060 Hb_024714_060 Hb_000191_020--Hb_024714_060 Hb_000896_120 Hb_000896_120 Hb_000191_020--Hb_000896_120 Hb_000191_020--Hb_001604_030 Hb_001268_080 Hb_001268_080 Hb_000191_020--Hb_001268_080 Hb_007140_020--Hb_000012_130 Hb_004738_010 Hb_004738_010 Hb_007140_020--Hb_004738_010 Hb_000188_130 Hb_000188_130 Hb_007140_020--Hb_000188_130 Hb_007140_020--Hb_001687_040 Hb_001135_080 Hb_001135_080 Hb_007140_020--Hb_001135_080 Hb_006573_220 Hb_006573_220 Hb_001687_040--Hb_006573_220 Hb_002097_060 Hb_002097_060 Hb_001687_040--Hb_002097_060 Hb_001191_090 Hb_001191_090 Hb_001687_040--Hb_001191_090 Hb_000069_100 Hb_000069_100 Hb_001687_040--Hb_000069_100 Hb_000272_070 Hb_000272_070 Hb_001687_040--Hb_000272_070 Hb_003053_030 Hb_003053_030 Hb_001687_040--Hb_003053_030 Hb_001785_040 Hb_001785_040 Hb_001604_030--Hb_001785_040 Hb_023386_010 Hb_023386_010 Hb_001604_030--Hb_023386_010 Hb_000012_100 Hb_000012_100 Hb_001604_030--Hb_000012_100 Hb_000789_110 Hb_000789_110 Hb_001604_030--Hb_000789_110 Hb_000260_200 Hb_000260_200 Hb_001604_030--Hb_000260_200 Hb_002603_150 Hb_002603_150 Hb_001604_030--Hb_002603_150 Hb_050806_010 Hb_050806_010 Hb_000027_150--Hb_050806_010 Hb_000027_150--Hb_001687_040 Hb_000027_150--Hb_000012_100 Hb_000027_150--Hb_006573_220 Hb_000181_300 Hb_000181_300 Hb_000027_150--Hb_000181_300 Hb_004449_200 Hb_004449_200 Hb_000027_150--Hb_004449_200 Hb_000012_130--Hb_024714_060 Hb_001439_170 Hb_001439_170 Hb_000012_130--Hb_001439_170 Hb_007594_120 Hb_007594_120 Hb_000012_130--Hb_007594_120 Hb_002027_400 Hb_002027_400 Hb_000012_130--Hb_002027_400 Hb_002759_230 Hb_002759_230 Hb_000012_130--Hb_002759_230 Hb_001160_030 Hb_001160_030 Hb_000012_130--Hb_001160_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
44.8857 4.23095 14.9358 28.0303 9.22508 14.4016
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
86.4522 80.7441 59.3419 7.07273 5.18242

CAGE analysis