Hb_000031_050

Information

Type -
Description -
Location Contig31: 58569-59816
Sequence    

Annotation

kegg
ID rcu:RCOM_0918500
description hypothetical protein
nr
ID XP_012076339.1
description PREDICTED: uncharacterized protein LOC105637478 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KBD9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07018 PE=4 SV=1
Gene Ontology
ID GO:0070461
description transcriptional adapter 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32773: 58819-60325
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000031_050 0.0 - - PREDICTED: uncharacterized protein LOC105637478 [Jatropha curcas]
2 Hb_006573_200 0.0689301018 - - PREDICTED: pentatricopeptide repeat-containing protein At5g52850, chloroplastic [Jatropha curcas]
3 Hb_006649_060 0.0718470303 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000077_230 0.0726696669 - - PREDICTED: uncharacterized protein LOC105646947 [Jatropha curcas]
5 Hb_004204_080 0.0727584942 - - diacylglycerol kinase, theta, putative [Ricinus communis]
6 Hb_007757_110 0.0753664789 - - PREDICTED: E3 ubiquitin-protein ligase UPL5 [Jatropha curcas]
7 Hb_124315_020 0.0816139959 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
8 Hb_000953_010 0.0878078965 - - hypothetical protein CISIN_1g0425012mg, partial [Citrus sinensis]
9 Hb_000077_070 0.088296572 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X1 [Jatropha curcas]
10 Hb_000025_360 0.0883149465 - - PREDICTED: protein SMG7 isoform X1 [Jatropha curcas]
11 Hb_001541_020 0.0889788351 - - PREDICTED: uncharacterized protein At3g49055 [Jatropha curcas]
12 Hb_001797_050 0.0897017445 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 3-like isoform X1 [Jatropha curcas]
13 Hb_000062_250 0.0907292803 - - PREDICTED: F-box protein SKIP14 [Jatropha curcas]
14 Hb_013405_050 0.0918734805 - - PREDICTED: probable receptor-like protein kinase At5g24010 [Jatropha curcas]
15 Hb_000514_060 0.0923808818 transcription factor TF Family: LUG PREDICTED: transcriptional corepressor LEUNIG isoform X1 [Jatropha curcas]
16 Hb_001245_070 0.0926431907 - - PREDICTED: uncharacterized protein LOC105633557 [Jatropha curcas]
17 Hb_000195_020 0.0935646131 - - PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Jatropha curcas]
18 Hb_001728_100 0.0937995546 - - hypothetical protein JCGZ_03429 [Jatropha curcas]
19 Hb_022408_010 0.0948563624 - - PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3 [Jatropha curcas]
20 Hb_002477_030 0.0967880119 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105631404 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000031_050 Hb_000031_050 Hb_006573_200 Hb_006573_200 Hb_000031_050--Hb_006573_200 Hb_006649_060 Hb_006649_060 Hb_000031_050--Hb_006649_060 Hb_000077_230 Hb_000077_230 Hb_000031_050--Hb_000077_230 Hb_004204_080 Hb_004204_080 Hb_000031_050--Hb_004204_080 Hb_007757_110 Hb_007757_110 Hb_000031_050--Hb_007757_110 Hb_124315_020 Hb_124315_020 Hb_000031_050--Hb_124315_020 Hb_006573_200--Hb_000077_230 Hb_000953_010 Hb_000953_010 Hb_006573_200--Hb_000953_010 Hb_006573_200--Hb_124315_020 Hb_000077_070 Hb_000077_070 Hb_006573_200--Hb_000077_070 Hb_001728_100 Hb_001728_100 Hb_006573_200--Hb_001728_100 Hb_007586_030 Hb_007586_030 Hb_006649_060--Hb_007586_030 Hb_002150_030 Hb_002150_030 Hb_006649_060--Hb_002150_030 Hb_001541_020 Hb_001541_020 Hb_006649_060--Hb_001541_020 Hb_022408_010 Hb_022408_010 Hb_006649_060--Hb_022408_010 Hb_183963_030 Hb_183963_030 Hb_006649_060--Hb_183963_030 Hb_000062_250 Hb_000062_250 Hb_000077_230--Hb_000062_250 Hb_000077_230--Hb_000077_070 Hb_000025_360 Hb_000025_360 Hb_000077_230--Hb_000025_360 Hb_000107_500 Hb_000107_500 Hb_000077_230--Hb_000107_500 Hb_000174_220 Hb_000174_220 Hb_000077_230--Hb_000174_220 Hb_001797_050 Hb_001797_050 Hb_004204_080--Hb_001797_050 Hb_005730_030 Hb_005730_030 Hb_004204_080--Hb_005730_030 Hb_005532_050 Hb_005532_050 Hb_004204_080--Hb_005532_050 Hb_004204_080--Hb_022408_010 Hb_004204_080--Hb_001541_020 Hb_010175_020 Hb_010175_020 Hb_007757_110--Hb_010175_020 Hb_002307_100 Hb_002307_100 Hb_007757_110--Hb_002307_100 Hb_001584_150 Hb_001584_150 Hb_007757_110--Hb_001584_150 Hb_000152_820 Hb_000152_820 Hb_007757_110--Hb_000152_820 Hb_175338_030 Hb_175338_030 Hb_007757_110--Hb_175338_030 Hb_000390_070 Hb_000390_070 Hb_007757_110--Hb_000390_070 Hb_001247_070 Hb_001247_070 Hb_124315_020--Hb_001247_070 Hb_000139_090 Hb_000139_090 Hb_124315_020--Hb_000139_090 Hb_003216_080 Hb_003216_080 Hb_124315_020--Hb_003216_080 Hb_001930_010 Hb_001930_010 Hb_124315_020--Hb_001930_010 Hb_001245_070 Hb_001245_070 Hb_124315_020--Hb_001245_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.2779 14.5293 4.09089 4.01426 16.3773 17.4826
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.85963 7.73597 15.2707 4.09649 5.8113

CAGE analysis