Gene annotation
Transcriptome id Sobic.007G054700.1
Synonym ATHAP5B, Sb07g004410, HAP5B, SbNF-YC8, Nuclear Factor Y, NF-YC2
Functional annotation tentative name (PubMedID : 31536532)
histone-like transcription factor and archaeal histone, putative, expressed
UniProt C5YHH0
Pfam PF00125
Panther DB PTHR10252 PTHR10252:SF43
NCBI CDD -
KEGG Orthology K08066; NFYC, nuclear transcription factor Y, gamma
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT1G56170 : nuclear factor Y, subunit C2
RAP-DB (Rice) LOC_Os01g24460.1 : histone-like transcription factor and archaeal histone, putative, expressed
MaizeGDB (Corn) Zm00025a053949
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G225800 AAA-type ATPase family protein, putative, expressed -
2 Sobic.005G089101 - K08066: NFYC, nuclear transcription factor Y, gamma
3 Sobic.005G197000 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
4 Sobic.003G213100 AAA-type ATPase family protein, putative, expressed -
5 Sobic.002G217000 expressed protein -
6 Sobic.003G291100 - -
7 Sobic.005G001500 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659895)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
8 Sobic.002G100000 OsFBL33 - F-box domain and LRR containing protein, expressed -
9 Sobic.007G122932 - -
10 Sobic.003G307600 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
11 Sobic.002G408700 OsFBX259 - F-box domain containing protein, expressed -
12 Sobic.010G181900 expressed protein -
13 Sobic.009G021300 Jacalin-like lectin domain containing protein, putative, expressed -
14 Sobic.009G013200 - -
15 Sobic.002G166800 RNA recognition motif containing protein, putative, expressed -
16 Sobic.007G037200 expressed protein -
17 Sobic.002G101200 zinc finger, C3HC4 type domain containing protein, expressed K10638: UHRF1, E3 ubiquitin-protein ligase UHRF1
18 Sobic.009G051201 - -
19 Sobic.006G004100 no apical meristem protein, putative, expressed -
20 Sobic.010G209300 expressed protein -


Gene co-expression network
sample Sobic007G054700 Sobic007G054700 Sobic003G225800 Sobic003G225800 Sobic007G054700--Sobic003G225800 Sobic005G089101 Sobic005G089101 Sobic007G054700--Sobic005G089101 Sobic005G197000 Sobic005G197000 Sobic007G054700--Sobic005G197000 Sobic003G213100 Sobic003G213100 Sobic007G054700--Sobic003G213100 Sobic002G217000 Sobic002G217000 Sobic007G054700--Sobic002G217000 Sobic003G291100 Sobic003G291100 Sobic007G054700--Sobic003G291100 Sobic005G001500 Sobic005G001500 Sobic007G054700--Sobic005G001500 Sobic002G100000 Sobic002G100000 Sobic007G054700--Sobic002G100000 Sobic007G122932 Sobic007G122932 Sobic007G054700--Sobic007G122932 Sobic003G225800--Sobic005G197000 Sobic003G225800--Sobic003G213100 Sobic003G225800--Sobic002G217000 Sobic003G225800--Sobic005G089101 Sobic003G225800--Sobic002G100000 Sobic006G004100 Sobic006G004100 Sobic003G225800--Sobic006G004100 Sobic002G101200 Sobic002G101200 Sobic003G225800--Sobic002G101200 Sobic003G307600 Sobic003G307600 Sobic003G225800--Sobic003G307600 Sobic007G037200 Sobic007G037200 Sobic003G225800--Sobic007G037200 Sobic005G089101--Sobic002G100000 Sobic005G089101--Sobic003G225800 Sobic010G181900 Sobic010G181900 Sobic005G089101--Sobic010G181900 Sobic005G089101--Sobic005G197000 Sobic005G089101--Sobic002G217000 Sobic005G089101--Sobic003G307600 Sobic005G089101--Sobic005G001500 Sobic005G089101--Sobic007G037200 Sobic004G212350 Sobic004G212350 Sobic005G089101--Sobic004G212350 Sobic005G197000--Sobic003G225800 Sobic005G197000--Sobic002G217000 Sobic005G197000--Sobic003G213100 Sobic005G197000--Sobic005G089101 Sobic005G197000--Sobic006G004100 Sobic005G197000--Sobic002G100000 Sobic004G220900 Sobic004G220900 Sobic005G197000--Sobic004G220900 Sobic002G058900 Sobic002G058900 Sobic005G197000--Sobic002G058900 Sobic005G197000--Sobic007G037200 Sobic003G213100--Sobic003G225800 Sobic003G213100--Sobic005G197000 Sobic003G213100--Sobic002G217000 Sobic009G051201 Sobic009G051201 Sobic003G213100--Sobic009G051201 Sobic002G069800 Sobic002G069800 Sobic003G213100--Sobic002G069800 Sobic003G213100--Sobic005G089101 Sobic005G003100 Sobic005G003100 Sobic003G213100--Sobic005G003100 Sobic009G013200 Sobic009G013200 Sobic003G213100--Sobic009G013200 Sobic003G213100--Sobic002G101200 Sobic002G217000--Sobic003G225800 Sobic002G217000--Sobic002G101200 Sobic002G217000--Sobic005G197000 Sobic002G217000--Sobic002G058900 Sobic002G217000--Sobic007G037200 Sobic002G217000--Sobic005G089101 Sobic005G032500 Sobic005G032500 Sobic002G217000--Sobic005G032500 Sobic002G217000--Sobic002G100000 Sobic002G217000--Sobic006G004100 Sobic002G408700 Sobic002G408700 Sobic003G291100--Sobic002G408700 Sobic010G209300 Sobic010G209300 Sobic003G291100--Sobic010G209300 Sobic003G291100--Sobic007G122932 Sobic003G291100--Sobic005G001500 Sobic003G291100--Sobic005G089101 Sobic003G291100--Sobic003G225800 Sobic009G021300 Sobic009G021300 Sobic003G291100--Sobic009G021300 Sobic003G291100--Sobic010G181900 Sobic003G291100--Sobic003G307600 Sobic005G001500--Sobic009G021300 Sobic005G001500--Sobic002G408700 Sobic003G227800 Sobic003G227800 Sobic005G001500--Sobic003G227800 Sobic010G102900 Sobic010G102900 Sobic005G001500--Sobic010G102900 Sobic001G142600 Sobic001G142600 Sobic005G001500--Sobic001G142600 Sobic005G001500--Sobic003G307600 Sobic008G071900 Sobic008G071900 Sobic005G001500--Sobic008G071900 Sobic003G063900 Sobic003G063900 Sobic005G001500--Sobic003G063900 Sobic005G001500--Sobic007G122932 Sobic002G100000--Sobic005G089101 Sobic002G100000--Sobic004G212350 Sobic002G100000--Sobic007G037200 Sobic002G100000--Sobic010G181900 Sobic002G100000--Sobic005G032500 Sobic002G100000--Sobic002G217000 Sobic008G168400 Sobic008G168400 Sobic002G100000--Sobic008G168400 Sobic002G100000--Sobic004G220900 Sobic007G187100 Sobic007G187100 Sobic002G100000--Sobic007G187100 Sobic007G122932--Sobic009G021300 Sobic007G147300 Sobic007G147300 Sobic007G122932--Sobic007G147300 Sobic007G123000 Sobic007G123000 Sobic007G122932--Sobic007G123000 Sobic007G122932--Sobic005G001500 Sobic007G122932--Sobic002G408700 Sobic007G122932--Sobic010G209300 Sobic007G122932--Sobic009G013200 Sobic007G122932--Sobic003G307600 Sobic008G001700 Sobic008G001700 Sobic007G122932--Sobic008G001700
Octagon: transcription factors


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