Gene annotation
Transcriptome id Sobic.005G089101.1
Synonym -
Functional annotation -
UniProt A0A1Z5RI22
Pfam PF00808
Panther DB PTHR10252 PTHR10252:SF42
NCBI CDD -
KEGG Orthology K08066; NFYC, nuclear transcription factor Y, gamma
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48590 : nuclear factor Y, subunit C1
RAP-DB (Rice) LOC_Os05g23910.1 : histone-like transcription factor and archaeal histone, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G100000 OsFBL33 - F-box domain and LRR containing protein, expressed -
2 Sobic.003G225800 AAA-type ATPase family protein, putative, expressed -
3 Sobic.010G181900 expressed protein -
4 Sobic.005G197000 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
5 Sobic.002G217000 expressed protein -
6 Sobic.003G307600 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
7 Sobic.005G001500 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659895)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
8 Sobic.007G037200 expressed protein -
9 Sobic.004G212350 - -
10 Sobic.004G220900 ethylene-insensitive protein 2, putative, expressed -
11 Sobic.005G032500 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
12 Sobic.006G004100 no apical meristem protein, putative, expressed -
13 Sobic.003G063900 - -
14 Sobic.007G187100 terpene synthase, putative, expressed -
15 Sobic.008G168400 GRAS family transcription factor domain containing protein, expressed K14494: DELLA protein
16 Sobic.005G079300 terpene synthase, putative, expressed -
17 Sobic.002G166800 RNA recognition motif containing protein, putative, expressed -
18 Sobic.002G408700 OsFBX259 - F-box domain containing protein, expressed -
19 Sobic.003G213100 AAA-type ATPase family protein, putative, expressed -
20 Sobic.003G227800 cytochrome P450 72A1, putative, expressed -


Gene co-expression network
sample Sobic005G089101 Sobic005G089101 Sobic002G100000 Sobic002G100000 Sobic005G089101--Sobic002G100000 Sobic003G225800 Sobic003G225800 Sobic005G089101--Sobic003G225800 Sobic010G181900 Sobic010G181900 Sobic005G089101--Sobic010G181900 Sobic005G197000 Sobic005G197000 Sobic005G089101--Sobic005G197000 Sobic002G217000 Sobic002G217000 Sobic005G089101--Sobic002G217000 Sobic003G307600 Sobic003G307600 Sobic005G089101--Sobic003G307600 Sobic005G001500 Sobic005G001500 Sobic005G089101--Sobic005G001500 Sobic007G037200 Sobic007G037200 Sobic005G089101--Sobic007G037200 Sobic004G212350 Sobic004G212350 Sobic005G089101--Sobic004G212350 Sobic002G100000--Sobic005G089101 Sobic002G100000--Sobic004G212350 Sobic002G100000--Sobic007G037200 Sobic002G100000--Sobic010G181900 Sobic005G032500 Sobic005G032500 Sobic002G100000--Sobic005G032500 Sobic002G100000--Sobic002G217000 Sobic008G168400 Sobic008G168400 Sobic002G100000--Sobic008G168400 Sobic004G220900 Sobic004G220900 Sobic002G100000--Sobic004G220900 Sobic007G187100 Sobic007G187100 Sobic002G100000--Sobic007G187100 Sobic003G225800--Sobic005G197000 Sobic003G213100 Sobic003G213100 Sobic003G225800--Sobic003G213100 Sobic003G225800--Sobic002G217000 Sobic003G225800--Sobic005G089101 Sobic003G225800--Sobic002G100000 Sobic006G004100 Sobic006G004100 Sobic003G225800--Sobic006G004100 Sobic002G101200 Sobic002G101200 Sobic003G225800--Sobic002G101200 Sobic003G225800--Sobic003G307600 Sobic003G225800--Sobic007G037200 Sobic010G181900--Sobic008G168400 Sobic010G181900--Sobic002G100000 Sobic010G181900--Sobic005G089101 Sobic010G181900--Sobic003G307600 Sobic003G063900 Sobic003G063900 Sobic010G181900--Sobic003G063900 Sobic005G079300 Sobic005G079300 Sobic010G181900--Sobic005G079300 Sobic010G181900--Sobic007G187100 Sobic010G181900--Sobic004G212350 Sobic002G381600 Sobic002G381600 Sobic010G181900--Sobic002G381600 Sobic005G197000--Sobic003G225800 Sobic005G197000--Sobic002G217000 Sobic005G197000--Sobic003G213100 Sobic005G197000--Sobic005G089101 Sobic005G197000--Sobic006G004100 Sobic005G197000--Sobic002G100000 Sobic005G197000--Sobic004G220900 Sobic002G058900 Sobic002G058900 Sobic005G197000--Sobic002G058900 Sobic005G197000--Sobic007G037200 Sobic002G217000--Sobic003G225800 Sobic002G217000--Sobic002G101200 Sobic002G217000--Sobic005G197000 Sobic002G217000--Sobic002G058900 Sobic002G217000--Sobic007G037200 Sobic002G217000--Sobic005G089101 Sobic002G217000--Sobic005G032500 Sobic002G217000--Sobic002G100000 Sobic002G217000--Sobic006G004100 Sobic003G307600--Sobic010G181900 Sobic003G307600--Sobic005G001500 Sobic003G307600--Sobic005G089101 Sobic003G307600--Sobic002G100000 Sobic003G227800 Sobic003G227800 Sobic003G307600--Sobic003G227800 Sobic003G307600--Sobic003G063900 Sobic002G408700 Sobic002G408700 Sobic003G307600--Sobic002G408700 Sobic003G307600--Sobic008G168400 Sobic009G021300 Sobic009G021300 Sobic003G307600--Sobic009G021300 Sobic005G001500--Sobic009G021300 Sobic005G001500--Sobic002G408700 Sobic005G001500--Sobic003G227800 Sobic010G102900 Sobic010G102900 Sobic005G001500--Sobic010G102900 Sobic001G142600 Sobic001G142600 Sobic005G001500--Sobic001G142600 Sobic005G001500--Sobic003G307600 Sobic008G071900 Sobic008G071900 Sobic005G001500--Sobic008G071900 Sobic005G001500--Sobic003G063900 Sobic007G122932 Sobic007G122932 Sobic005G001500--Sobic007G122932 Sobic007G037200--Sobic005G032500 Sobic007G037200--Sobic004G220900 Sobic007G037200--Sobic002G058900 Sobic008G159300 Sobic008G159300 Sobic007G037200--Sobic008G159300 Sobic007G037200--Sobic002G100000 Sobic007G037200--Sobic002G217000 Sobic008G031400 Sobic008G031400 Sobic007G037200--Sobic008G031400 Sobic003G106400 Sobic003G106400 Sobic007G037200--Sobic003G106400 Sobic007G037200--Sobic004G212350 Sobic004G212350--Sobic007G187100 Sobic009G061900 Sobic009G061900 Sobic004G212350--Sobic009G061900 Sobic004G212350--Sobic002G100000 Sobic004G212350--Sobic008G168400 Sobic004G212350--Sobic005G079300 Sobic001G129900 Sobic001G129900 Sobic004G212350--Sobic001G129900 Sobic004G212350--Sobic002G381600 Sobic004G139700 Sobic004G139700 Sobic004G212350--Sobic004G139700 Sobic002G409300 Sobic002G409300 Sobic004G212350--Sobic002G409300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.