Gene annotation
Transcriptome id Sobic.010G181900.1
Synonym Sb10g023310
Functional annotation expressed protein
UniProt A0A194YK15
Pfam PF11321
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g42500.1 : expressed protein
MaizeGDB (Corn) Zm00025a014680
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G168400 GRAS family transcription factor domain containing protein, expressed K14494: DELLA protein
2 Sobic.002G100000 OsFBL33 - F-box domain and LRR containing protein, expressed -
3 Sobic.005G089101 - K08066: NFYC, nuclear transcription factor Y, gamma
4 Sobic.003G307600 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
5 Sobic.003G063900 - -
6 Sobic.005G079300 terpene synthase, putative, expressed -
7 Sobic.007G187100 terpene synthase, putative, expressed -
8 Sobic.004G212350 - -
9 Sobic.002G381600 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
10 Sobic.001G129900 indole-3-acetate beta-glucosyltransferase, putative, expressed K13692: UDP-glucose:(indol-3-yl)acetate beta-D-glucosyltransferase
11 Sobic.005G001500 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659895)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
12 Sobic.003G227800 cytochrome P450 72A1, putative, expressed -
13 Sobic.001G142600 OsFBX103 - F-box domain containing protein, expressed -
14 Sobic.007G037200 expressed protein -
15 Sobic.002G408700 OsFBX259 - F-box domain containing protein, expressed -
16 Sobic.006G080500 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.005G056300 no apical meristem protein, putative, expressed -
18 Sobic.009G052400 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
19 Sobic.005G032500 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
20 Sobic.009G061900 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic010G181900 Sobic010G181900 Sobic008G168400 Sobic008G168400 Sobic010G181900--Sobic008G168400 Sobic002G100000 Sobic002G100000 Sobic010G181900--Sobic002G100000 Sobic005G089101 Sobic005G089101 Sobic010G181900--Sobic005G089101 Sobic003G307600 Sobic003G307600 Sobic010G181900--Sobic003G307600 Sobic003G063900 Sobic003G063900 Sobic010G181900--Sobic003G063900 Sobic005G079300 Sobic005G079300 Sobic010G181900--Sobic005G079300 Sobic007G187100 Sobic007G187100 Sobic010G181900--Sobic007G187100 Sobic004G212350 Sobic004G212350 Sobic010G181900--Sobic004G212350 Sobic002G381600 Sobic002G381600 Sobic010G181900--Sobic002G381600 Sobic001G129900 Sobic001G129900 Sobic008G168400--Sobic001G129900 Sobic008G168400--Sobic002G381600 Sobic008G168400--Sobic005G079300 Sobic006G080500 Sobic006G080500 Sobic008G168400--Sobic006G080500 Sobic009G052400 Sobic009G052400 Sobic008G168400--Sobic009G052400 Sobic008G168400--Sobic003G063900 Sobic005G021100 Sobic005G021100 Sobic008G168400--Sobic005G021100 Sobic008G168400--Sobic007G187100 Sobic001G392900 Sobic001G392900 Sobic008G168400--Sobic001G392900 Sobic002G100000--Sobic005G089101 Sobic002G100000--Sobic004G212350 Sobic007G037200 Sobic007G037200 Sobic002G100000--Sobic007G037200 Sobic002G100000--Sobic010G181900 Sobic005G032500 Sobic005G032500 Sobic002G100000--Sobic005G032500 Sobic002G217000 Sobic002G217000 Sobic002G100000--Sobic002G217000 Sobic002G100000--Sobic008G168400 Sobic004G220900 Sobic004G220900 Sobic002G100000--Sobic004G220900 Sobic002G100000--Sobic007G187100 Sobic005G089101--Sobic002G100000 Sobic003G225800 Sobic003G225800 Sobic005G089101--Sobic003G225800 Sobic005G089101--Sobic010G181900 Sobic005G197000 Sobic005G197000 Sobic005G089101--Sobic005G197000 Sobic005G089101--Sobic002G217000 Sobic005G089101--Sobic003G307600 Sobic005G001500 Sobic005G001500 Sobic005G089101--Sobic005G001500 Sobic005G089101--Sobic007G037200 Sobic005G089101--Sobic004G212350 Sobic003G307600--Sobic010G181900 Sobic003G307600--Sobic005G001500 Sobic003G307600--Sobic005G089101 Sobic003G307600--Sobic002G100000 Sobic003G227800 Sobic003G227800 Sobic003G307600--Sobic003G227800 Sobic003G307600--Sobic003G063900 Sobic002G408700 Sobic002G408700 Sobic003G307600--Sobic002G408700 Sobic003G307600--Sobic008G168400 Sobic009G021300 Sobic009G021300 Sobic003G307600--Sobic009G021300 Sobic003G063900--Sobic008G168400 Sobic003G063900--Sobic003G227800 Sobic003G063900--Sobic005G079300 Sobic003G063900--Sobic001G129900 Sobic003G063900--Sobic002G381600 Sobic003G063900--Sobic006G080500 Sobic005G056300 Sobic005G056300 Sobic003G063900--Sobic005G056300 Sobic001G142600 Sobic001G142600 Sobic003G063900--Sobic001G142600 Sobic003G063900--Sobic009G052400 Sobic005G079300--Sobic001G129900 Sobic005G079300--Sobic006G080500 Sobic005G079300--Sobic008G168400 Sobic005G079300--Sobic005G056300 Sobic005G079300--Sobic009G052400 Sobic005G079300--Sobic002G381600 Sobic005G079300--Sobic007G187100 Sobic004G133600 Sobic004G133600 Sobic005G079300--Sobic004G133600 Sobic002G192600 Sobic002G192600 Sobic005G079300--Sobic002G192600 Sobic009G061900 Sobic009G061900 Sobic007G187100--Sobic009G061900 Sobic007G187100--Sobic005G079300 Sobic007G187100--Sobic001G129900 Sobic007G187100--Sobic002G192600 Sobic002G409300 Sobic002G409300 Sobic007G187100--Sobic002G409300 Sobic007G187100--Sobic004G212350 Sobic007G187100--Sobic004G133600 Sobic007G187100--Sobic008G168400 Sobic005G186300 Sobic005G186300 Sobic007G187100--Sobic005G186300 Sobic004G212350--Sobic007G187100 Sobic004G212350--Sobic009G061900 Sobic004G212350--Sobic002G100000 Sobic004G212350--Sobic008G168400 Sobic004G212350--Sobic005G079300 Sobic004G212350--Sobic001G129900 Sobic004G212350--Sobic002G381600 Sobic004G139700 Sobic004G139700 Sobic004G212350--Sobic004G139700 Sobic004G212350--Sobic002G409300 Sobic002G381600--Sobic001G129900 Sobic002G381600--Sobic008G168400 Sobic002G381600--Sobic009G052400 Sobic002G381600--Sobic006G080500 Sobic002G381600--Sobic005G079300 Sobic002G381600--Sobic004G133600 Sobic002G381600--Sobic005G021100 Sobic002G381600--Sobic002G192600 Sobic002G381600--Sobic005G056300
Octagon: transcription factors


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