Gene annotation
Transcriptome id Sobic.008G168400.1
Synonym RGA, Sb08g021375, RGA1
Functional annotation GRAS family transcription factor domain containing protein, expressed
UniProt A0A1B6PED4
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF7
NCBI CDD -
KEGG Orthology K14494; DELLA protein
Gene Ontology GO:0005634; nucleus GO:0000989obsolete transcription factor activity, transcription factor binding


Orthologs (automatic annotation)
TAIR AT2G01570 : GRAS family transcription factor family protein
RAP-DB (Rice) LOC_Os05g49930.1 : GRAS family transcription factor domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G168400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G129900 indole-3-acetate beta-glucosyltransferase, putative, expressed K13692: UDP-glucose:(indol-3-yl)acetate beta-D-glucosyltransferase
2 Sobic.002G381600 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
3 Sobic.005G079300 terpene synthase, putative, expressed -
4 Sobic.006G080500 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.009G052400 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
6 Sobic.003G063900 - -
7 Sobic.005G021100 - -
8 Sobic.007G187100 terpene synthase, putative, expressed -
9 Sobic.001G392900 - -
10 Sobic.005G056300 no apical meristem protein, putative, expressed -
11 Sobic.009G061900 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
12 Sobic.004G133600 Sugar transporter(PubMedID : 27330561)@"ZmSWEET4c(Ortholog in maize:Sosso et al., 2015(PubMedID : 31659882)@Zhang et al., 2015)"(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
13 Sobic.002G192600 no apical meristem protein, putative, expressed -
14 Sobic.004G212350 - -
15 Sobic.003G227800 cytochrome P450 72A1, putative, expressed -
16 Sobic.010G181900 expressed protein -
17 Sobic.003G135000 major facilitator superfamily antiporter, putative, expressed -
18 Sobic.004G139700 OsSCP7 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
19 Sobic.006G104800 dnaJ domain containing protein, expressed -
20 Sobic.001G200900 LTPL160 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic008G168400 Sobic008G168400 Sobic001G129900 Sobic001G129900 Sobic008G168400--Sobic001G129900 Sobic002G381600 Sobic002G381600 Sobic008G168400--Sobic002G381600 Sobic005G079300 Sobic005G079300 Sobic008G168400--Sobic005G079300 Sobic006G080500 Sobic006G080500 Sobic008G168400--Sobic006G080500 Sobic009G052400 Sobic009G052400 Sobic008G168400--Sobic009G052400 Sobic003G063900 Sobic003G063900 Sobic008G168400--Sobic003G063900 Sobic005G021100 Sobic005G021100 Sobic008G168400--Sobic005G021100 Sobic007G187100 Sobic007G187100 Sobic008G168400--Sobic007G187100 Sobic001G392900 Sobic001G392900 Sobic008G168400--Sobic001G392900 Sobic001G129900--Sobic006G080500 Sobic001G129900--Sobic009G052400 Sobic001G129900--Sobic002G381600 Sobic001G129900--Sobic008G168400 Sobic001G129900--Sobic005G079300 Sobic002G192600 Sobic002G192600 Sobic001G129900--Sobic002G192600 Sobic004G133600 Sobic004G133600 Sobic001G129900--Sobic004G133600 Sobic005G056300 Sobic005G056300 Sobic001G129900--Sobic005G056300 Sobic001G129900--Sobic007G187100 Sobic002G381600--Sobic001G129900 Sobic002G381600--Sobic008G168400 Sobic002G381600--Sobic009G052400 Sobic002G381600--Sobic006G080500 Sobic002G381600--Sobic005G079300 Sobic002G381600--Sobic004G133600 Sobic002G381600--Sobic005G021100 Sobic002G381600--Sobic002G192600 Sobic002G381600--Sobic005G056300 Sobic005G079300--Sobic001G129900 Sobic005G079300--Sobic006G080500 Sobic005G079300--Sobic008G168400 Sobic005G079300--Sobic005G056300 Sobic005G079300--Sobic009G052400 Sobic005G079300--Sobic002G381600 Sobic005G079300--Sobic007G187100 Sobic005G079300--Sobic004G133600 Sobic005G079300--Sobic002G192600 Sobic006G080500--Sobic001G129900 Sobic006G080500--Sobic009G052400 Sobic006G080500--Sobic005G056300 Sobic003G135000 Sobic003G135000 Sobic006G080500--Sobic003G135000 Sobic006G080500--Sobic002G381600 Sobic006G080500--Sobic005G079300 Sobic002G078800 Sobic002G078800 Sobic006G080500--Sobic002G078800 Sobic006G080500--Sobic008G168400 Sobic006G080500--Sobic002G192600 Sobic009G052400--Sobic001G129900 Sobic009G052400--Sobic006G080500 Sobic009G052400--Sobic002G381600 Sobic009G052400--Sobic002G192600 Sobic009G052400--Sobic004G133600 Sobic009G052400--Sobic005G079300 Sobic009G052400--Sobic002G078800 Sobic009G052400--Sobic008G168400 Sobic006G178400 Sobic006G178400 Sobic009G052400--Sobic006G178400 Sobic003G063900--Sobic008G168400 Sobic003G227800 Sobic003G227800 Sobic003G063900--Sobic003G227800 Sobic003G063900--Sobic005G079300 Sobic003G063900--Sobic001G129900 Sobic003G063900--Sobic002G381600 Sobic003G063900--Sobic006G080500 Sobic003G063900--Sobic005G056300 Sobic001G142600 Sobic001G142600 Sobic003G063900--Sobic001G142600 Sobic003G063900--Sobic009G052400 Sobic002G089500 Sobic002G089500 Sobic005G021100--Sobic002G089500 Sobic005G021100--Sobic001G392900 Sobic004G171600 Sobic004G171600 Sobic005G021100--Sobic004G171600 Sobic005G021100--Sobic002G381600 Sobic005G021100--Sobic008G168400 Sobic002G293100 Sobic002G293100 Sobic005G021100--Sobic002G293100 Sobic005G021100--Sobic009G052400 Sobic005G021100--Sobic001G129900 Sobic005G077900 Sobic005G077900 Sobic005G021100--Sobic005G077900 Sobic009G061900 Sobic009G061900 Sobic007G187100--Sobic009G061900 Sobic007G187100--Sobic005G079300 Sobic007G187100--Sobic001G129900 Sobic007G187100--Sobic002G192600 Sobic002G409300 Sobic002G409300 Sobic007G187100--Sobic002G409300 Sobic004G212350 Sobic004G212350 Sobic007G187100--Sobic004G212350 Sobic007G187100--Sobic004G133600 Sobic007G187100--Sobic008G168400 Sobic005G186300 Sobic005G186300 Sobic007G187100--Sobic005G186300 Sobic001G392900--Sobic005G021100 Sobic001G392900--Sobic002G089500 Sobic001G392900--Sobic008G168400 Sobic001G392900--Sobic002G381600 Sobic001G392900--Sobic001G129900 Sobic006G104800 Sobic006G104800 Sobic001G392900--Sobic006G104800 Sobic001G392900--Sobic009G052400 Sobic001G392900--Sobic004G171600 Sobic001G392900--Sobic003G063900
Octagon: transcription factors


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