Gene annotation
| Transcriptome id | Sobic.009G052400.1 |
|---|---|
| Synonym | 1, ATAVP3, Sb09g004450, AtVHP1, AVP-3, AVP1 |
| Functional annotation | inorganic H+ pyrophosphatase, putative, expressed |
| UniProt | C5Z0L2 |
| Pfam | PF03030 |
| Panther DB | PTHR31998 PTHR31998:SF8 |
| NCBI CDD | - |
| KEGG Orthology | K01507; inorganic pyrophosphatase |
| Gene Ontology | GO:0016020; membrane GO:0009678pyrophosphate hydrolysis-driven proton transmembrane transporter activity GO:0004427inorganic diphosphatase activity |
Orthologs (automatic annotation)
| TAIR | AT1G15690 : Inorganic H pyrophosphatase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os05g06480.1 : inorganic H+ pyrophosphatase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a051395 , Zm00025a042963 , Zm00025a049815 , Zm00025a036215 |
| Brachypodium | KQK07378 , KQK04235 |
| Barley | HORVU7Hr1G115540.11 , HORVU7Hr1G115540.10 , HORVU7Hr1G115540.5 , HORVU7Hr1G115540.4 , HORVU7Hr1G115540.7 , HORVU7Hr1G115540.6 , HORVU7Hr1G115540.1 , HORVU7Hr1G115540.3 , HORVU7Hr1G115540.2 , HORVU7Hr1G115540.9 , HORVU7Hr1G115540.8 , HORVU1Hr1G023100.1 , HORVU1Hr1G023100.2 , HORVU1Hr1G061140.9 , HORVU1Hr1G061140.8 , HORVU1Hr1G061140.3 , HORVU1Hr1G061140.2 , HORVU1Hr1G061140.1 , HORVU1Hr1G061140.7 , HORVU1Hr1G061140.6 , HORVU1Hr1G061140.5 , HORVU1Hr1G061140.4 , HORVU1Hr1G061140.12 , HORVU1Hr1G061140.11 , HORVU1Hr1G061140.10 |
| Wheat | TraesCS1B02G124600 , TraesCS1B02G264600 , TraesCS1D02G253200 , TraesCS1A02G253600 , TraesCS1A02G107200 , TraesCS1A02G107200 , TraesCS1D02G107600 |
| Populus | - |
JBrowse
| Sobic.009G052400 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G129900 | indole-3-acetate beta-glucosyltransferase, putative, expressed | K13692: UDP-glucose:(indol-3-yl)acetate beta-D-glucosyltransferase |
| 2 | Sobic.006G080500 | helix-loop-helix DNA-binding domain containing protein, expressed | - |
| 3 | Sobic.002G381600 | uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed | K01087: trehalose 6-phosphate phosphatase |
| 4 | Sobic.002G192600 | no apical meristem protein, putative, expressed | - |
| 5 | Sobic.004G133600 | Sugar transporter(PubMedID : 27330561)@"ZmSWEET4c(Ortholog in maize:Sosso et al., 2015(PubMedID : 31659882)@Zhang et al., 2015)"(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed | K15382: SLC50A, solute carrier family 50 (sugar transporter) |
| 6 | Sobic.005G079300 | terpene synthase, putative, expressed | - |
| 7 | Sobic.002G078800 | LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 8 | Sobic.008G168400 | GRAS family transcription factor domain containing protein, expressed | K14494: DELLA protein |
| 9 | Sobic.006G178400 | monocopper oxidase, putative, expressed | - |
| 10 | Sobic.009G061900 | BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed | - |
| 11 | Sobic.002G409250 | - | - |
| 12 | Sobic.005G056300 | no apical meristem protein, putative, expressed | - |
| 13 | Sobic.006G015750 | - | - |
| 14 | Sobic.003G135000 | major facilitator superfamily antiporter, putative, expressed | - |
| 15 | Sobic.003G091400 | seven in absentia protein family domain containing protein, expressed | - |
| 16 | Sobic.001G200900 | LTPL160 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 17 | Sobic.007G187100 | terpene synthase, putative, expressed | - |
| 18 | Sobic.005G021100 | - | - |
| 19 | Sobic.004G139700 | OsSCP7 - Putative Serine Carboxypeptidase homologue, expressed | K16296: serine carboxypeptidase-like clade I |
| 20 | Sobic.005G186300 | - | - |
Gene co-expression network
Octagon: transcription factors
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