Gene annotation
| Transcriptome id | Sobic.002G381600.3,Sobic.002G381600.1,Sobic.002G381600.4,Sobic.002G381600.2 |
|---|---|
| Synonym | Sb02g039820 |
| Functional annotation | uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed |
| UniProt | A0A1B6QFR8 , A0A1W0W7F5 , A0A1B6QFN6 , A0A1W0W7K0 |
| Pfam | PF02358 |
| Panther DB | PTHR10788 PTHR10788:SF37 |
| NCBI CDD | - |
| KEGG Orthology | K01087; trehalose 6-phosphate phosphatase |
| Gene Ontology | GO:0005992; trehalose biosynthetic process GO:0003824catalytic activity |
Orthologs (automatic annotation)
| TAIR | AT1G35910 : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os07g43160.1 : uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed |
| MaizeGDB (Corn) | Zm00025a048809 |
| Brachypodium | - |
| Barley | HORVU7Hr1G037140.4 , HORVU7Hr1G037140.5 , HORVU7Hr1G037140.2 , HORVU7Hr1G037140.3 , HORVU7Hr1G037140.1 , HORVU5Hr1G058300.5 , HORVU5Hr1G058300.4 , HORVU5Hr1G058300.6 , HORVU5Hr1G058300.1 , HORVU5Hr1G058300.3 , HORVU5Hr1G058300.2 |
| Wheat | TraesCS2D02G168300 , TraesCS2D02G168300 , TraesCS2B02G187100 , TraesCS2B02G187200 |
| Populus | - |
JBrowse
| Sobic.002G381600 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G129900 | indole-3-acetate beta-glucosyltransferase, putative, expressed | K13692: UDP-glucose:(indol-3-yl)acetate beta-D-glucosyltransferase |
| 2 | Sobic.008G168400 | GRAS family transcription factor domain containing protein, expressed | K14494: DELLA protein |
| 3 | Sobic.009G052400 | inorganic H+ pyrophosphatase, putative, expressed | K01507: inorganic pyrophosphatase |
| 4 | Sobic.006G080500 | helix-loop-helix DNA-binding domain containing protein, expressed | - |
| 5 | Sobic.005G079300 | terpene synthase, putative, expressed | - |
| 6 | Sobic.004G133600 | Sugar transporter(PubMedID : 27330561)@"ZmSWEET4c(Ortholog in maize:Sosso et al., 2015(PubMedID : 31659882)@Zhang et al., 2015)"(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed | K15382: SLC50A, solute carrier family 50 (sugar transporter) |
| 7 | Sobic.005G021100 | - | - |
| 8 | Sobic.002G192600 | no apical meristem protein, putative, expressed | - |
| 9 | Sobic.005G056300 | no apical meristem protein, putative, expressed | - |
| 10 | Sobic.009G061900 | BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed | - |
| 11 | Sobic.007G187100 | terpene synthase, putative, expressed | - |
| 12 | Sobic.003G063900 | - | - |
| 13 | Sobic.001G392900 | - | - |
| 14 | Sobic.010G060100 | leucoanthocyanidin dioxygenase, putative, expressed | - |
| 15 | Sobic.006G104800 | dnaJ domain containing protein, expressed | - |
| 16 | Sobic.003G135000 | major facilitator superfamily antiporter, putative, expressed | - |
| 17 | Sobic.002G078800 | LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 18 | Sobic.004G139700 | OsSCP7 - Putative Serine Carboxypeptidase homologue, expressed | K16296: serine carboxypeptidase-like clade I |
| 19 | Sobic.006G178400 | monocopper oxidase, putative, expressed | - |
| 20 | Sobic.001G200900 | LTPL160 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
Gene co-expression network
Octagon: transcription factors
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