Gene annotation
Transcriptome id Sobic.010G060100.1
Synonym Sb10g005200
Functional annotation leucoanthocyanidin dioxygenase, putative, expressed
UniProt A0A194YHJ8
Pfam PF14226 PF03171
Panther DB PTHR10209 PTHR10209:SF157
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G20400 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os02g17940.3 : leucoanthocyanidin dioxygenase, putative, expressed
MaizeGDB (Corn) Zm00025a049819 , Zm00025a004043
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.010G060100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G133600 Sugar transporter(PubMedID : 27330561)@"ZmSWEET4c(Ortholog in maize:Sosso et al., 2015(PubMedID : 31659882)@Zhang et al., 2015)"(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
2 Sobic.007G205400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
3 Sobic.002G192600 no apical meristem protein, putative, expressed -
4 Sobic.001G129900 indole-3-acetate beta-glucosyltransferase, putative, expressed K13692: UDP-glucose:(indol-3-yl)acetate beta-D-glucosyltransferase
5 Sobic.002G381600 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
6 Sobic.007G187100 terpene synthase, putative, expressed -
7 Sobic.009G061900 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
8 Sobic.009G052400 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
9 Sobic.005G079300 terpene synthase, putative, expressed -
10 Sobic.006G080500 helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.005G186300 - -
12 Sobic.008G168400 GRAS family transcription factor domain containing protein, expressed K14494: DELLA protein
13 Sobic.002G078800 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.004G139700 OsSCP7 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
15 Sobic.001G200900 LTPL160 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.005G077900 OsFBX411 - F-box domain containing protein, expressed -
17 Sobic.005G056300 no apical meristem protein, putative, expressed -
18 Sobic.002G409300 expressed protein -
19 Sobic.002G409250 - -
20 Sobic.002G293100 ZOS9-17 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic010G060100 Sobic010G060100 Sobic004G133600 Sobic004G133600 Sobic010G060100--Sobic004G133600 Sobic007G205400 Sobic007G205400 Sobic010G060100--Sobic007G205400 Sobic002G192600 Sobic002G192600 Sobic010G060100--Sobic002G192600 Sobic001G129900 Sobic001G129900 Sobic010G060100--Sobic001G129900 Sobic002G381600 Sobic002G381600 Sobic010G060100--Sobic002G381600 Sobic007G187100 Sobic007G187100 Sobic010G060100--Sobic007G187100 Sobic009G061900 Sobic009G061900 Sobic010G060100--Sobic009G061900 Sobic009G052400 Sobic009G052400 Sobic010G060100--Sobic009G052400 Sobic005G079300 Sobic005G079300 Sobic010G060100--Sobic005G079300 Sobic004G133600--Sobic002G192600 Sobic004G133600--Sobic010G060100 Sobic004G133600--Sobic009G052400 Sobic004G133600--Sobic001G129900 Sobic004G133600--Sobic007G205400 Sobic004G133600--Sobic002G381600 Sobic006G080500 Sobic006G080500 Sobic004G133600--Sobic006G080500 Sobic004G133600--Sobic005G079300 Sobic004G133600--Sobic009G061900 Sobic005G186300 Sobic005G186300 Sobic007G205400--Sobic005G186300 Sobic007G205400--Sobic002G192600 Sobic007G205400--Sobic010G060100 Sobic007G205400--Sobic004G133600 Sobic007G205400--Sobic009G061900 Sobic002G078800 Sobic002G078800 Sobic007G205400--Sobic002G078800 Sobic001G200900 Sobic001G200900 Sobic007G205400--Sobic001G200900 Sobic002G409250 Sobic002G409250 Sobic007G205400--Sobic002G409250 Sobic002G409300 Sobic002G409300 Sobic007G205400--Sobic002G409300 Sobic002G192600--Sobic004G133600 Sobic002G192600--Sobic005G186300 Sobic002G192600--Sobic009G052400 Sobic002G192600--Sobic002G078800 Sobic002G192600--Sobic001G129900 Sobic002G192600--Sobic009G061900 Sobic002G192600--Sobic007G205400 Sobic002G192600--Sobic006G080500 Sobic006G015750 Sobic006G015750 Sobic002G192600--Sobic006G015750 Sobic001G129900--Sobic006G080500 Sobic001G129900--Sobic009G052400 Sobic001G129900--Sobic002G381600 Sobic008G168400 Sobic008G168400 Sobic001G129900--Sobic008G168400 Sobic001G129900--Sobic005G079300 Sobic001G129900--Sobic002G192600 Sobic001G129900--Sobic004G133600 Sobic005G056300 Sobic005G056300 Sobic001G129900--Sobic005G056300 Sobic001G129900--Sobic007G187100 Sobic002G381600--Sobic001G129900 Sobic002G381600--Sobic008G168400 Sobic002G381600--Sobic009G052400 Sobic002G381600--Sobic006G080500 Sobic002G381600--Sobic005G079300 Sobic002G381600--Sobic004G133600 Sobic005G021100 Sobic005G021100 Sobic002G381600--Sobic005G021100 Sobic002G381600--Sobic002G192600 Sobic002G381600--Sobic005G056300 Sobic007G187100--Sobic009G061900 Sobic007G187100--Sobic005G079300 Sobic007G187100--Sobic001G129900 Sobic007G187100--Sobic002G192600 Sobic007G187100--Sobic002G409300 Sobic004G212350 Sobic004G212350 Sobic007G187100--Sobic004G212350 Sobic007G187100--Sobic004G133600 Sobic007G187100--Sobic008G168400 Sobic007G187100--Sobic005G186300 Sobic009G061900--Sobic007G187100 Sobic009G061900--Sobic005G186300 Sobic009G061900--Sobic001G200900 Sobic009G061900--Sobic002G192600 Sobic009G061900--Sobic002G409300 Sobic009G061900--Sobic009G052400 Sobic009G061900--Sobic001G129900 Sobic009G061900--Sobic004G133600 Sobic005G174000 Sobic005G174000 Sobic009G061900--Sobic005G174000 Sobic009G052400--Sobic001G129900 Sobic009G052400--Sobic006G080500 Sobic009G052400--Sobic002G381600 Sobic009G052400--Sobic002G192600 Sobic009G052400--Sobic004G133600 Sobic009G052400--Sobic005G079300 Sobic009G052400--Sobic002G078800 Sobic009G052400--Sobic008G168400 Sobic006G178400 Sobic006G178400 Sobic009G052400--Sobic006G178400 Sobic005G079300--Sobic001G129900 Sobic005G079300--Sobic006G080500 Sobic005G079300--Sobic008G168400 Sobic005G079300--Sobic005G056300 Sobic005G079300--Sobic009G052400 Sobic005G079300--Sobic002G381600 Sobic005G079300--Sobic007G187100 Sobic005G079300--Sobic004G133600 Sobic005G079300--Sobic002G192600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.