Gene annotation
Transcriptome id Sobic.003G063900.1
Synonym
Functional annotation -
UniProt A0A1B6Q1L9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS5D02G482700
Populus -


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cDNA sequences
Sobic.003G063900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G168400 GRAS family transcription factor domain containing protein, expressed K14494: DELLA protein
2 Sobic.003G227800 cytochrome P450 72A1, putative, expressed -
3 Sobic.005G079300 terpene synthase, putative, expressed -
4 Sobic.001G129900 indole-3-acetate beta-glucosyltransferase, putative, expressed K13692: UDP-glucose:(indol-3-yl)acetate beta-D-glucosyltransferase
5 Sobic.002G381600 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
6 Sobic.006G080500 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.005G056300 no apical meristem protein, putative, expressed -
8 Sobic.001G142600 OsFBX103 - F-box domain containing protein, expressed -
9 Sobic.009G052400 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
10 Sobic.010G181900 expressed protein -
11 Sobic.001G392900 - -
12 Sobic.003G135000 major facilitator superfamily antiporter, putative, expressed -
13 Sobic.006G104800 dnaJ domain containing protein, expressed -
14 Sobic.005G001500 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659895)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
15 Sobic.010G102900 protein of unknown function DUF1675 domain containing protein, expressed -
16 Sobic.005G021100 - -
17 Sobic.006G178400 monocopper oxidase, putative, expressed -
18 Sobic.007G187100 terpene synthase, putative, expressed -
19 Sobic.002G053100 RNA recognition motif containing protein, expressed -
20 Sobic.004G133600 Sugar transporter(PubMedID : 27330561)@"ZmSWEET4c(Ortholog in maize:Sosso et al., 2015(PubMedID : 31659882)@Zhang et al., 2015)"(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)


Gene co-expression network
sample Sobic003G063900 Sobic003G063900 Sobic008G168400 Sobic008G168400 Sobic003G063900--Sobic008G168400 Sobic003G227800 Sobic003G227800 Sobic003G063900--Sobic003G227800 Sobic005G079300 Sobic005G079300 Sobic003G063900--Sobic005G079300 Sobic001G129900 Sobic001G129900 Sobic003G063900--Sobic001G129900 Sobic002G381600 Sobic002G381600 Sobic003G063900--Sobic002G381600 Sobic006G080500 Sobic006G080500 Sobic003G063900--Sobic006G080500 Sobic005G056300 Sobic005G056300 Sobic003G063900--Sobic005G056300 Sobic001G142600 Sobic001G142600 Sobic003G063900--Sobic001G142600 Sobic009G052400 Sobic009G052400 Sobic003G063900--Sobic009G052400 Sobic008G168400--Sobic001G129900 Sobic008G168400--Sobic002G381600 Sobic008G168400--Sobic005G079300 Sobic008G168400--Sobic006G080500 Sobic008G168400--Sobic009G052400 Sobic008G168400--Sobic003G063900 Sobic005G021100 Sobic005G021100 Sobic008G168400--Sobic005G021100 Sobic007G187100 Sobic007G187100 Sobic008G168400--Sobic007G187100 Sobic001G392900 Sobic001G392900 Sobic008G168400--Sobic001G392900 Sobic003G227800--Sobic005G056300 Sobic010G102900 Sobic010G102900 Sobic003G227800--Sobic010G102900 Sobic003G227800--Sobic001G142600 Sobic003G227800--Sobic003G063900 Sobic003G227800--Sobic005G079300 Sobic003G135000 Sobic003G135000 Sobic003G227800--Sobic003G135000 Sobic008G071900 Sobic008G071900 Sobic003G227800--Sobic008G071900 Sobic003G227800--Sobic006G080500 Sobic005G001500 Sobic005G001500 Sobic003G227800--Sobic005G001500 Sobic005G079300--Sobic001G129900 Sobic005G079300--Sobic006G080500 Sobic005G079300--Sobic008G168400 Sobic005G079300--Sobic005G056300 Sobic005G079300--Sobic009G052400 Sobic005G079300--Sobic002G381600 Sobic005G079300--Sobic007G187100 Sobic004G133600 Sobic004G133600 Sobic005G079300--Sobic004G133600 Sobic002G192600 Sobic002G192600 Sobic005G079300--Sobic002G192600 Sobic001G129900--Sobic006G080500 Sobic001G129900--Sobic009G052400 Sobic001G129900--Sobic002G381600 Sobic001G129900--Sobic008G168400 Sobic001G129900--Sobic005G079300 Sobic001G129900--Sobic002G192600 Sobic001G129900--Sobic004G133600 Sobic001G129900--Sobic005G056300 Sobic001G129900--Sobic007G187100 Sobic002G381600--Sobic001G129900 Sobic002G381600--Sobic008G168400 Sobic002G381600--Sobic009G052400 Sobic002G381600--Sobic006G080500 Sobic002G381600--Sobic005G079300 Sobic002G381600--Sobic004G133600 Sobic002G381600--Sobic005G021100 Sobic002G381600--Sobic002G192600 Sobic002G381600--Sobic005G056300 Sobic006G080500--Sobic001G129900 Sobic006G080500--Sobic009G052400 Sobic006G080500--Sobic005G056300 Sobic006G080500--Sobic003G135000 Sobic006G080500--Sobic002G381600 Sobic006G080500--Sobic005G079300 Sobic002G078800 Sobic002G078800 Sobic006G080500--Sobic002G078800 Sobic006G080500--Sobic008G168400 Sobic006G080500--Sobic002G192600 Sobic005G056300--Sobic006G080500 Sobic005G056300--Sobic003G135000 Sobic005G056300--Sobic005G079300 Sobic005G056300--Sobic003G227800 Sobic005G056300--Sobic001G129900 Sobic005G056300--Sobic009G052400 Sobic005G056300--Sobic002G381600 Sobic006G178400 Sobic006G178400 Sobic005G056300--Sobic006G178400 Sobic005G056300--Sobic008G168400 Sobic001G142600--Sobic003G227800 Sobic001G142600--Sobic010G102900 Sobic006G104800 Sobic006G104800 Sobic001G142600--Sobic006G104800 Sobic001G142600--Sobic003G063900 Sobic001G142600--Sobic008G071900 Sobic001G142600--Sobic005G001500 Sobic002G053100 Sobic002G053100 Sobic001G142600--Sobic002G053100 Sobic002G408700 Sobic002G408700 Sobic001G142600--Sobic002G408700 Sobic001G142600--Sobic005G056300 Sobic009G052400--Sobic001G129900 Sobic009G052400--Sobic006G080500 Sobic009G052400--Sobic002G381600 Sobic009G052400--Sobic002G192600 Sobic009G052400--Sobic004G133600 Sobic009G052400--Sobic005G079300 Sobic009G052400--Sobic002G078800 Sobic009G052400--Sobic008G168400 Sobic009G052400--Sobic006G178400
Octagon: transcription factors


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