Gene annotation
Transcriptome id Sobic.006G178400.1
Synonym sks5, Sb06g025300
Functional annotation monocopper oxidase, putative, expressed
UniProt C5YDY7
Pfam PF07731 PF07732 PF00394
Panther DB PTHR11709 PTHR11709:SF64
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT1G76160 : SKU5 similar 5
RAP-DB (Rice) LOC_Os04g47400.1 : monocopper oxidase, putative, expressed
MaizeGDB (Corn) Zm00025a056820
Brachypodium KQJ84043
Barley HORVU2Hr1G096250.5 , HORVU2Hr1G096250.4 , HORVU2Hr1G096250.2 , HORVU2Hr1G096250.3 , HORVU2Hr1G096250.1
Wheat TraesCS7B02G359700 , TraesCS2A02G406200 , TraesCS2A02G406200 , TraesCS2A02G406200 , TraesCS2D02G403100 , TraesCS2B02G423900
Populus -


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cDNA sequences
Sobic.006G178400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G135000 major facilitator superfamily antiporter, putative, expressed -
2 Sobic.002G078800 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.009G052400 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
4 Sobic.006G080500 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.002G409250 - -
6 Sobic.003G091400 seven in absentia protein family domain containing protein, expressed -
7 Sobic.006G015750 - -
8 Sobic.005G193700 - -
9 Sobic.005G056300 no apical meristem protein, putative, expressed -
10 Sobic.001G253400 AP2 domain containing protein, expressed -
11 Sobic.001G158600 MYB family transcription factor, putative, expressed -
12 Sobic.001G129900 indole-3-acetate beta-glucosyltransferase, putative, expressed K13692: UDP-glucose:(indol-3-yl)acetate beta-D-glucosyltransferase
13 Sobic.004G133600 Sugar transporter(PubMedID : 27330561)@"ZmSWEET4c(Ortholog in maize:Sosso et al., 2015(PubMedID : 31659882)@Zhang et al., 2015)"(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
14 Sobic.002G192600 no apical meristem protein, putative, expressed -
15 Sobic.004G294100 ZOS2-14 - C2H2 zinc finger protein, expressed -
16 Sobic.005G079300 terpene synthase, putative, expressed -
17 Sobic.002G381600 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
18 Sobic.004G139700 OsSCP7 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
19 Sobic.009G040000 myb-like DNA-binding domain, SHAQKYF class family protein, expressed -
20 Sobic.004G099750 - -


Gene co-expression network
sample Sobic006G178400 Sobic006G178400 Sobic003G135000 Sobic003G135000 Sobic006G178400--Sobic003G135000 Sobic002G078800 Sobic002G078800 Sobic006G178400--Sobic002G078800 Sobic009G052400 Sobic009G052400 Sobic006G178400--Sobic009G052400 Sobic006G080500 Sobic006G080500 Sobic006G178400--Sobic006G080500 Sobic002G409250 Sobic002G409250 Sobic006G178400--Sobic002G409250 Sobic003G091400 Sobic003G091400 Sobic006G178400--Sobic003G091400 Sobic006G015750 Sobic006G015750 Sobic006G178400--Sobic006G015750 Sobic005G193700 Sobic005G193700 Sobic006G178400--Sobic005G193700 Sobic005G056300 Sobic005G056300 Sobic006G178400--Sobic005G056300 Sobic003G135000--Sobic005G056300 Sobic003G135000--Sobic006G080500 Sobic003G135000--Sobic006G178400 Sobic003G135000--Sobic002G078800 Sobic001G158600 Sobic001G158600 Sobic003G135000--Sobic001G158600 Sobic003G135000--Sobic005G193700 Sobic001G253400 Sobic001G253400 Sobic003G135000--Sobic001G253400 Sobic003G135000--Sobic002G409250 Sobic003G135000--Sobic003G091400 Sobic002G078800--Sobic006G015750 Sobic002G078800--Sobic003G091400 Sobic002G078800--Sobic002G409250 Sobic002G192600 Sobic002G192600 Sobic002G078800--Sobic002G192600 Sobic002G078800--Sobic006G080500 Sobic002G078800--Sobic006G178400 Sobic002G078800--Sobic009G052400 Sobic002G078800--Sobic003G135000 Sobic002G078800--Sobic005G193700 Sobic001G129900 Sobic001G129900 Sobic009G052400--Sobic001G129900 Sobic009G052400--Sobic006G080500 Sobic002G381600 Sobic002G381600 Sobic009G052400--Sobic002G381600 Sobic009G052400--Sobic002G192600 Sobic004G133600 Sobic004G133600 Sobic009G052400--Sobic004G133600 Sobic005G079300 Sobic005G079300 Sobic009G052400--Sobic005G079300 Sobic009G052400--Sobic002G078800 Sobic008G168400 Sobic008G168400 Sobic009G052400--Sobic008G168400 Sobic009G052400--Sobic006G178400 Sobic006G080500--Sobic001G129900 Sobic006G080500--Sobic009G052400 Sobic006G080500--Sobic005G056300 Sobic006G080500--Sobic003G135000 Sobic006G080500--Sobic002G381600 Sobic006G080500--Sobic005G079300 Sobic006G080500--Sobic002G078800 Sobic006G080500--Sobic008G168400 Sobic006G080500--Sobic002G192600 Sobic002G409250--Sobic003G091400 Sobic002G409250--Sobic006G015750 Sobic002G409250--Sobic002G078800 Sobic002G409250--Sobic005G193700 Sobic002G409250--Sobic001G253400 Sobic002G409250--Sobic006G178400 Sobic002G409250--Sobic002G192600 Sobic002G409250--Sobic006G080500 Sobic002G409250--Sobic003G135000 Sobic003G091400--Sobic006G015750 Sobic003G091400--Sobic002G409250 Sobic003G091400--Sobic002G078800 Sobic003G091400--Sobic005G193700 Sobic003G091400--Sobic006G178400 Sobic003G091400--Sobic002G192600 Sobic003G091400--Sobic001G253400 Sobic003G091400--Sobic006G080500 Sobic003G091400--Sobic003G135000 Sobic006G015750--Sobic003G091400 Sobic006G015750--Sobic002G409250 Sobic006G015750--Sobic002G078800 Sobic006G015750--Sobic002G192600 Sobic006G015750--Sobic005G193700 Sobic006G015750--Sobic006G178400 Sobic006G015750--Sobic001G253400 Sobic006G015750--Sobic006G080500 Sobic006G015750--Sobic009G052400 Sobic005G193700--Sobic001G158600 Sobic005G193700--Sobic001G253400 Sobic006G051750 Sobic006G051750 Sobic005G193700--Sobic006G051750 Sobic005G193700--Sobic002G409250 Sobic005G193700--Sobic003G091400 Sobic005G193700--Sobic006G015750 Sobic005G193700--Sobic003G135000 Sobic004G261000 Sobic004G261000 Sobic005G193700--Sobic004G261000 Sobic005G193700--Sobic002G078800 Sobic005G056300--Sobic006G080500 Sobic005G056300--Sobic003G135000 Sobic005G056300--Sobic005G079300 Sobic003G227800 Sobic003G227800 Sobic005G056300--Sobic003G227800 Sobic005G056300--Sobic001G129900 Sobic005G056300--Sobic009G052400 Sobic005G056300--Sobic002G381600 Sobic005G056300--Sobic006G178400 Sobic005G056300--Sobic008G168400
Octagon: transcription factors


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