Gene annotation
Transcriptome id Sobic.007G122932.1
Synonym -
Functional annotation -
UniProt A0A1Z5RAJ7
Pfam PF13902
Panther DB PTHR32019
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G03250 : -
RAP-DB (Rice) LOC_Os11g04990.1 : expressed protein
MaizeGDB (Corn) Zm00025a033454 , Zm00025a036538
Brachypodium KQJ92331
Barley HORVU5Hr1G040870.2 , HORVU5Hr1G040870.1
Wheat TraesCS5A02G133600 , TraesCS5D02G141400 , TraesCS5A02G133600 , TraesCS5B02G131700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G021300 Jacalin-like lectin domain containing protein, putative, expressed -
2 Sobic.007G147300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
3 Sobic.007G123000 sex determination protein tasselseed-2, putative, expressed -
4 Sobic.005G001500 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659895)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
5 Sobic.002G408700 OsFBX259 - F-box domain containing protein, expressed -
6 Sobic.010G209300 expressed protein -
7 Sobic.009G013200 - -
8 Sobic.003G307600 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
9 Sobic.008G001700 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659911)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
10 Sobic.003G291100 - -
11 Sobic.010G102900 protein of unknown function DUF1675 domain containing protein, expressed -
12 Sobic.005G089101 - K08066: NFYC, nuclear transcription factor Y, gamma
13 Sobic.008G071900 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
14 Sobic.001G330600 NAD dependent epimerase/dehydratase family protein, putative, expressed -
15 Sobic.003G225800 AAA-type ATPase family protein, putative, expressed -
16 Sobic.001G142600 OsFBX103 - F-box domain containing protein, expressed -
17 Sobic.003G227800 cytochrome P450 72A1, putative, expressed -
18 Sobic.005G075000 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.002G147500 early fruit mRNA, putative, expressed -
20 Sobic.003G213100 AAA-type ATPase family protein, putative, expressed -


Gene co-expression network
sample Sobic007G122932 Sobic007G122932 Sobic009G021300 Sobic009G021300 Sobic007G122932--Sobic009G021300 Sobic007G147300 Sobic007G147300 Sobic007G122932--Sobic007G147300 Sobic007G123000 Sobic007G123000 Sobic007G122932--Sobic007G123000 Sobic005G001500 Sobic005G001500 Sobic007G122932--Sobic005G001500 Sobic002G408700 Sobic002G408700 Sobic007G122932--Sobic002G408700 Sobic010G209300 Sobic010G209300 Sobic007G122932--Sobic010G209300 Sobic009G013200 Sobic009G013200 Sobic007G122932--Sobic009G013200 Sobic003G307600 Sobic003G307600 Sobic007G122932--Sobic003G307600 Sobic008G001700 Sobic008G001700 Sobic007G122932--Sobic008G001700 Sobic009G021300--Sobic005G001500 Sobic009G021300--Sobic007G122932 Sobic009G021300--Sobic002G408700 Sobic010G102900 Sobic010G102900 Sobic009G021300--Sobic010G102900 Sobic009G021300--Sobic008G001700 Sobic008G071900 Sobic008G071900 Sobic009G021300--Sobic008G071900 Sobic009G021300--Sobic007G147300 Sobic009G021300--Sobic007G123000 Sobic003G227800 Sobic003G227800 Sobic009G021300--Sobic003G227800 Sobic007G147300--Sobic009G021300 Sobic007G147300--Sobic007G123000 Sobic007G147300--Sobic007G122932 Sobic007G147300--Sobic008G001700 Sobic009G086800 Sobic009G086800 Sobic007G147300--Sobic009G086800 Sobic007G147300--Sobic008G071900 Sobic007G147300--Sobic010G209300 Sobic007G147300--Sobic002G408700 Sobic004G116200 Sobic004G116200 Sobic007G147300--Sobic004G116200 Sobic007G123000--Sobic007G147300 Sobic007G123000--Sobic007G122932 Sobic007G123000--Sobic009G021300 Sobic007G123000--Sobic008G001700 Sobic007G123000--Sobic005G001500 Sobic007G123000--Sobic002G408700 Sobic007G123000--Sobic010G209300 Sobic007G123000--Sobic008G071900 Sobic007G123000--Sobic009G086800 Sobic005G001500--Sobic009G021300 Sobic005G001500--Sobic002G408700 Sobic005G001500--Sobic003G227800 Sobic005G001500--Sobic010G102900 Sobic001G142600 Sobic001G142600 Sobic005G001500--Sobic001G142600 Sobic005G001500--Sobic003G307600 Sobic005G001500--Sobic008G071900 Sobic003G063900 Sobic003G063900 Sobic005G001500--Sobic003G063900 Sobic005G001500--Sobic007G122932 Sobic002G408700--Sobic005G001500 Sobic002G408700--Sobic010G209300 Sobic002G408700--Sobic009G021300 Sobic002G408700--Sobic001G142600 Sobic002G408700--Sobic007G122932 Sobic010G181900 Sobic010G181900 Sobic002G408700--Sobic010G181900 Sobic002G408700--Sobic010G102900 Sobic003G291100 Sobic003G291100 Sobic002G408700--Sobic003G291100 Sobic002G408700--Sobic003G227800 Sobic010G209300--Sobic002G408700 Sobic010G209300--Sobic007G122932 Sobic010G209300--Sobic009G021300 Sobic010G209300--Sobic003G291100 Sobic010G209300--Sobic005G001500 Sobic006G271400 Sobic006G271400 Sobic010G209300--Sobic006G271400 Sobic010G209300--Sobic001G142600 Sobic010G209300--Sobic007G147300 Sobic010G058000 Sobic010G058000 Sobic010G209300--Sobic010G058000 Sobic001G330600 Sobic001G330600 Sobic009G013200--Sobic001G330600 Sobic009G013200--Sobic007G122932 Sobic002G147500 Sobic002G147500 Sobic009G013200--Sobic002G147500 Sobic003G213100 Sobic003G213100 Sobic009G013200--Sobic003G213100 Sobic005G075000 Sobic005G075000 Sobic009G013200--Sobic005G075000 Sobic005G003100 Sobic005G003100 Sobic009G013200--Sobic005G003100 Sobic009G013200--Sobic007G123000 Sobic009G051201 Sobic009G051201 Sobic009G013200--Sobic009G051201 Sobic003G225800 Sobic003G225800 Sobic009G013200--Sobic003G225800 Sobic003G307600--Sobic010G181900 Sobic003G307600--Sobic005G001500 Sobic005G089101 Sobic005G089101 Sobic003G307600--Sobic005G089101 Sobic002G100000 Sobic002G100000 Sobic003G307600--Sobic002G100000 Sobic003G307600--Sobic003G227800 Sobic003G307600--Sobic003G063900 Sobic003G307600--Sobic002G408700 Sobic008G168400 Sobic008G168400 Sobic003G307600--Sobic008G168400 Sobic003G307600--Sobic009G021300 Sobic004G171500 Sobic004G171500 Sobic008G001700--Sobic004G171500 Sobic008G001700--Sobic008G071900 Sobic001G362900 Sobic001G362900 Sobic008G001700--Sobic001G362900 Sobic008G001700--Sobic004G116200 Sobic008G001700--Sobic009G021300 Sobic004G085100 Sobic004G085100 Sobic008G001700--Sobic004G085100 Sobic008G001700--Sobic010G102900 Sobic008G001700--Sobic007G147300 Sobic002G088000 Sobic002G088000 Sobic008G001700--Sobic002G088000
Octagon: transcription factors


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