Gene annotation
Transcriptome id Sobic.010G209300.2
Synonym Sb10g025610
Functional annotation expressed protein
UniProt A0A194YKL5
Pfam PF14303
Panther DB PTHR11260 PTHR11260:SF328
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G47680 : DNA binding
RAP-DB (Rice) LOC_Os10g31120.1 : transposon protein, putative, Pong sub-class, expressed
MaizeGDB (Corn) Zm00025a051606
Brachypodium KQK16832
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G408700 OsFBX259 - F-box domain containing protein, expressed -
2 Sobic.007G122932 - -
3 Sobic.009G021300 Jacalin-like lectin domain containing protein, putative, expressed -
4 Sobic.003G291100 - -
5 Sobic.005G001500 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659895)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
6 Sobic.006G271400 methyl-CpG binding domain containing protein, expressed -
7 Sobic.001G142600 OsFBX103 - F-box domain containing protein, expressed -
8 Sobic.007G147300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
9 Sobic.010G058000 myb-like DNA-binding domain, SHAQKYF class family protein, expressed -
10 Sobic.007G123000 sex determination protein tasselseed-2, putative, expressed -
11 Sobic.005G075000 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.008G001700 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659911)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
13 Sobic.002G166800 RNA recognition motif containing protein, putative, expressed -
14 Sobic.002G053100 RNA recognition motif containing protein, expressed -
15 Sobic.010G102900 protein of unknown function DUF1675 domain containing protein, expressed -
16 Sobic.006G031000 MYB family transcription factor, putative, expressed -
17 Sobic.008G071900 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
18 Sobic.010G181900 expressed protein -
19 Sobic.003G063900 - -
20 Sobic.005G090500 - -


Gene co-expression network
sample Sobic010G209300 Sobic010G209300 Sobic002G408700 Sobic002G408700 Sobic010G209300--Sobic002G408700 Sobic007G122932 Sobic007G122932 Sobic010G209300--Sobic007G122932 Sobic009G021300 Sobic009G021300 Sobic010G209300--Sobic009G021300 Sobic003G291100 Sobic003G291100 Sobic010G209300--Sobic003G291100 Sobic005G001500 Sobic005G001500 Sobic010G209300--Sobic005G001500 Sobic006G271400 Sobic006G271400 Sobic010G209300--Sobic006G271400 Sobic001G142600 Sobic001G142600 Sobic010G209300--Sobic001G142600 Sobic007G147300 Sobic007G147300 Sobic010G209300--Sobic007G147300 Sobic010G058000 Sobic010G058000 Sobic010G209300--Sobic010G058000 Sobic002G408700--Sobic005G001500 Sobic002G408700--Sobic010G209300 Sobic002G408700--Sobic009G021300 Sobic002G408700--Sobic001G142600 Sobic002G408700--Sobic007G122932 Sobic010G181900 Sobic010G181900 Sobic002G408700--Sobic010G181900 Sobic010G102900 Sobic010G102900 Sobic002G408700--Sobic010G102900 Sobic002G408700--Sobic003G291100 Sobic003G227800 Sobic003G227800 Sobic002G408700--Sobic003G227800 Sobic007G122932--Sobic009G021300 Sobic007G122932--Sobic007G147300 Sobic007G123000 Sobic007G123000 Sobic007G122932--Sobic007G123000 Sobic007G122932--Sobic005G001500 Sobic007G122932--Sobic002G408700 Sobic007G122932--Sobic010G209300 Sobic009G013200 Sobic009G013200 Sobic007G122932--Sobic009G013200 Sobic003G307600 Sobic003G307600 Sobic007G122932--Sobic003G307600 Sobic008G001700 Sobic008G001700 Sobic007G122932--Sobic008G001700 Sobic009G021300--Sobic005G001500 Sobic009G021300--Sobic007G122932 Sobic009G021300--Sobic002G408700 Sobic009G021300--Sobic010G102900 Sobic009G021300--Sobic008G001700 Sobic008G071900 Sobic008G071900 Sobic009G021300--Sobic008G071900 Sobic009G021300--Sobic007G147300 Sobic009G021300--Sobic007G123000 Sobic009G021300--Sobic003G227800 Sobic003G291100--Sobic002G408700 Sobic003G291100--Sobic010G209300 Sobic003G291100--Sobic007G122932 Sobic003G291100--Sobic005G001500 Sobic005G089101 Sobic005G089101 Sobic003G291100--Sobic005G089101 Sobic003G225800 Sobic003G225800 Sobic003G291100--Sobic003G225800 Sobic003G291100--Sobic009G021300 Sobic003G291100--Sobic010G181900 Sobic003G291100--Sobic003G307600 Sobic005G001500--Sobic009G021300 Sobic005G001500--Sobic002G408700 Sobic005G001500--Sobic003G227800 Sobic005G001500--Sobic010G102900 Sobic005G001500--Sobic001G142600 Sobic005G001500--Sobic003G307600 Sobic005G001500--Sobic008G071900 Sobic003G063900 Sobic003G063900 Sobic005G001500--Sobic003G063900 Sobic005G001500--Sobic007G122932 Sobic005G075000 Sobic005G075000 Sobic006G271400--Sobic005G075000 Sobic006G271400--Sobic010G209300 Sobic005G090500 Sobic005G090500 Sobic006G271400--Sobic005G090500 Sobic006G031000 Sobic006G031000 Sobic006G271400--Sobic006G031000 Sobic006G271400--Sobic010G058000 Sobic005G074900 Sobic005G074900 Sobic006G271400--Sobic005G074900 Sobic006G271400--Sobic002G408700 Sobic002G053100 Sobic002G053100 Sobic006G271400--Sobic002G053100 Sobic003G363300 Sobic003G363300 Sobic006G271400--Sobic003G363300 Sobic001G142600--Sobic003G227800 Sobic001G142600--Sobic010G102900 Sobic006G104800 Sobic006G104800 Sobic001G142600--Sobic006G104800 Sobic001G142600--Sobic003G063900 Sobic001G142600--Sobic008G071900 Sobic001G142600--Sobic005G001500 Sobic001G142600--Sobic002G053100 Sobic001G142600--Sobic002G408700 Sobic005G056300 Sobic005G056300 Sobic001G142600--Sobic005G056300 Sobic007G147300--Sobic009G021300 Sobic007G147300--Sobic007G123000 Sobic007G147300--Sobic007G122932 Sobic007G147300--Sobic008G001700 Sobic009G086800 Sobic009G086800 Sobic007G147300--Sobic009G086800 Sobic007G147300--Sobic008G071900 Sobic007G147300--Sobic010G209300 Sobic007G147300--Sobic002G408700 Sobic004G116200 Sobic004G116200 Sobic007G147300--Sobic004G116200 Sobic010G058000--Sobic010G209300 Sobic010G058000--Sobic006G271400 Sobic010G058000--Sobic006G031000 Sobic010G058000--Sobic002G408700 Sobic010G058000--Sobic001G142600 Sobic010G058000--Sobic005G090500 Sobic010G058000--Sobic003G291100 Sobic010G058000--Sobic002G053100 Sobic002G166800 Sobic002G166800 Sobic010G058000--Sobic002G166800
Octagon: transcription factors


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