Hb_188487_010

Information

Type -
Description -
Location Contig188487: 2903-3226
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP42608.1
description hypothetical protein JCGZ_24382 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L5V9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24382 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_188487_010 0.0 - - hypothetical protein JCGZ_24382 [Jatropha curcas]
2 Hb_001780_010 0.1477246437 - - hypothetical protein CICLE_v10006597mg [Citrus clementina]
3 Hb_002774_010 0.1549218409 - - -
4 Hb_001524_020 0.1688701657 - - Pollen-specific protein C13 precursor, putative [Ricinus communis]
5 Hb_155556_010 0.2003566182 - - putative methylenetetrahydrofolate reductase [Morus notabilis]
6 Hb_000920_070 0.2091942102 - - -
7 Hb_041184_010 0.2214230277 desease resistance Gene Name: NB-ARC Disease resistance protein RPS5, putative [Ricinus communis]
8 Hb_001001_110 0.2425131202 - - -
9 Hb_010810_070 0.2485794666 - - serine/threonine kinase, putative [Ricinus communis]
10 Hb_095835_010 0.2555862121 - - hypothetical protein JCGZ_23410 [Jatropha curcas]
11 Hb_002092_040 0.2662136937 - - PREDICTED: protein YLS3 [Jatropha curcas]
12 Hb_057638_010 0.2667223636 - - PREDICTED: uncharacterized protein LOC105637008 [Jatropha curcas]
13 Hb_000160_100 0.2783875571 - - PREDICTED: uncharacterized transporter YBR287W-like [Populus euphratica]
14 Hb_008489_010 0.2837842156 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
15 Hb_018202_060 0.290563012 - - PREDICTED: germin-like protein subfamily 1 member 13 [Jatropha curcas]
16 Hb_002675_120 0.2906625622 - - DNA-repair protein xrcc1, putative [Ricinus communis]
17 Hb_019299_050 0.2913630633 - - -
18 Hb_005625_050 0.2918288449 - - hypothetical protein PRUPE_ppa024499mg, partial [Prunus persica]
19 Hb_007757_090 0.2923555675 - - PREDICTED: uncharacterized protein LOC105793478 [Gossypium raimondii]
20 Hb_128531_010 0.2929284186 - - phosphoprotein phosphatase, putative [Ricinus communis]

Gene co-expression network

sample Hb_188487_010 Hb_188487_010 Hb_001780_010 Hb_001780_010 Hb_188487_010--Hb_001780_010 Hb_002774_010 Hb_002774_010 Hb_188487_010--Hb_002774_010 Hb_001524_020 Hb_001524_020 Hb_188487_010--Hb_001524_020 Hb_155556_010 Hb_155556_010 Hb_188487_010--Hb_155556_010 Hb_000920_070 Hb_000920_070 Hb_188487_010--Hb_000920_070 Hb_041184_010 Hb_041184_010 Hb_188487_010--Hb_041184_010 Hb_001780_010--Hb_155556_010 Hb_001780_010--Hb_001524_020 Hb_001780_010--Hb_000920_070 Hb_001780_010--Hb_002774_010 Hb_002092_040 Hb_002092_040 Hb_001780_010--Hb_002092_040 Hb_002774_010--Hb_001524_020 Hb_002774_010--Hb_000920_070 Hb_002774_010--Hb_155556_010 Hb_159957_020 Hb_159957_020 Hb_002774_010--Hb_159957_020 Hb_001524_020--Hb_155556_010 Hb_001524_020--Hb_000920_070 Hb_010810_070 Hb_010810_070 Hb_001524_020--Hb_010810_070 Hb_155556_010--Hb_000920_070 Hb_012071_010 Hb_012071_010 Hb_155556_010--Hb_012071_010 Hb_012295_020 Hb_012295_020 Hb_155556_010--Hb_012295_020 Hb_001519_210 Hb_001519_210 Hb_155556_010--Hb_001519_210 Hb_000920_070--Hb_010810_070 Hb_095835_010 Hb_095835_010 Hb_000920_070--Hb_095835_010 Hb_057638_010 Hb_057638_010 Hb_000920_070--Hb_057638_010 Hb_002849_150 Hb_002849_150 Hb_041184_010--Hb_002849_150 Hb_008749_090 Hb_008749_090 Hb_041184_010--Hb_008749_090 Hb_003517_010 Hb_003517_010 Hb_041184_010--Hb_003517_010 Hb_041184_010--Hb_002774_010 Hb_006916_190 Hb_006916_190 Hb_041184_010--Hb_006916_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.106281 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.360914 1.67071 0.786826

CAGE analysis