Hb_002774_010

Information

Type -
Description -
Location Contig2774: 6551-7556
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002774_010 0.0 - - -
2 Hb_001524_020 0.1259568361 - - Pollen-specific protein C13 precursor, putative [Ricinus communis]
3 Hb_001780_010 0.1341294855 - - hypothetical protein CICLE_v10006597mg [Citrus clementina]
4 Hb_188487_010 0.1549218409 - - hypothetical protein JCGZ_24382 [Jatropha curcas]
5 Hb_000920_070 0.2158245006 - - -
6 Hb_155556_010 0.2233115763 - - putative methylenetetrahydrofolate reductase [Morus notabilis]
7 Hb_159957_020 0.2277363139 - - -
8 Hb_000159_030 0.2277859007 - - putative glycosyltransferase, partial [Aralia elata]
9 Hb_055880_010 0.2282808691 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
10 Hb_009142_030 0.2285156473 - - UDP-glucosyltransferase, putative [Ricinus communis]
11 Hb_001514_160 0.228687296 - - hypothetical protein JCGZ_16070 [Jatropha curcas]
12 Hb_000967_030 0.2290063039 - - -
13 Hb_014034_010 0.2291662814 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
14 Hb_002890_050 0.229276515 - - -
15 Hb_001221_120 0.2295732164 - - cytochrome P450, putative [Ricinus communis]
16 Hb_019299_050 0.2363603227 - - -
17 Hb_005625_050 0.2429076586 - - hypothetical protein PRUPE_ppa024499mg, partial [Prunus persica]
18 Hb_007757_090 0.2456422311 - - PREDICTED: uncharacterized protein LOC105793478 [Gossypium raimondii]
19 Hb_041184_010 0.2459611302 desease resistance Gene Name: NB-ARC Disease resistance protein RPS5, putative [Ricinus communis]
20 Hb_006261_010 0.2480399551 - - PREDICTED: uncharacterized protein LOC104110884 [Nicotiana tomentosiformis]

Gene co-expression network

sample Hb_002774_010 Hb_002774_010 Hb_001524_020 Hb_001524_020 Hb_002774_010--Hb_001524_020 Hb_001780_010 Hb_001780_010 Hb_002774_010--Hb_001780_010 Hb_188487_010 Hb_188487_010 Hb_002774_010--Hb_188487_010 Hb_000920_070 Hb_000920_070 Hb_002774_010--Hb_000920_070 Hb_155556_010 Hb_155556_010 Hb_002774_010--Hb_155556_010 Hb_159957_020 Hb_159957_020 Hb_002774_010--Hb_159957_020 Hb_001524_020--Hb_001780_010 Hb_001524_020--Hb_188487_010 Hb_001524_020--Hb_155556_010 Hb_001524_020--Hb_000920_070 Hb_010810_070 Hb_010810_070 Hb_001524_020--Hb_010810_070 Hb_001780_010--Hb_155556_010 Hb_001780_010--Hb_000920_070 Hb_001780_010--Hb_188487_010 Hb_002092_040 Hb_002092_040 Hb_001780_010--Hb_002092_040 Hb_188487_010--Hb_155556_010 Hb_188487_010--Hb_000920_070 Hb_041184_010 Hb_041184_010 Hb_188487_010--Hb_041184_010 Hb_000920_070--Hb_155556_010 Hb_000920_070--Hb_010810_070 Hb_095835_010 Hb_095835_010 Hb_000920_070--Hb_095835_010 Hb_057638_010 Hb_057638_010 Hb_000920_070--Hb_057638_010 Hb_012071_010 Hb_012071_010 Hb_155556_010--Hb_012071_010 Hb_012295_020 Hb_012295_020 Hb_155556_010--Hb_012295_020 Hb_001519_210 Hb_001519_210 Hb_155556_010--Hb_001519_210 Hb_000159_030 Hb_000159_030 Hb_159957_020--Hb_000159_030 Hb_000967_030 Hb_000967_030 Hb_159957_020--Hb_000967_030 Hb_055880_010 Hb_055880_010 Hb_159957_020--Hb_055880_010 Hb_009142_030 Hb_009142_030 Hb_159957_020--Hb_009142_030 Hb_001514_160 Hb_001514_160 Hb_159957_020--Hb_001514_160 Hb_014034_010 Hb_014034_010 Hb_159957_020--Hb_014034_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0758652 0.515175 0.16861

CAGE analysis