Hb_164010_030

Information

Type -
Description -
Location Contig164010: 17049-18038
Sequence    

Annotation

kegg
ID dosa:Os04t0410200-00
description Os04g0410200; Similar to H0321H01.14 protein.
nr
ID XP_012071042.1
description PREDICTED: serine/threonine-protein kinase D6PK [Jatropha curcas]
swissprot
ID P40376
description cAMP-dependent protein kinase catalytic subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pka1 PE=1 SV=1
trembl
ID A0A067L5D9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01056 PE=4 SV=1
Gene Ontology
ID GO:0004672
description serine threonine-protein kinase d6pk-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15071: 16352-20902 , PASA_asmbl_15072: 15916-20909
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_164010_030 0.0 - - PREDICTED: serine/threonine-protein kinase D6PK [Jatropha curcas]
2 Hb_000497_300 0.0659535813 - - peroxisomal membrane protein [Hevea brasiliensis]
3 Hb_000116_260 0.0682171214 - - PREDICTED: uncharacterized protein LOC105628572 [Jatropha curcas]
4 Hb_001377_490 0.0688024486 - - PREDICTED: uncharacterized protein LOC105642821 [Jatropha curcas]
5 Hb_001163_100 0.0710768919 - - serine/threonine protein kinase, putative [Ricinus communis]
6 Hb_000260_010 0.0718977805 - - PREDICTED: phospholipid-transporting ATPase 1-like [Jatropha curcas]
7 Hb_001014_030 0.0722153595 - - ATP binding protein, putative [Ricinus communis]
8 Hb_000406_140 0.0730141162 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002620_020 0.0780022599 transcription factor TF Family: bZIP DNA binding protein, putative [Ricinus communis]
10 Hb_000749_220 0.0797622607 - - PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Jatropha curcas]
11 Hb_003847_030 0.0805570423 - - PREDICTED: pentatricopeptide repeat-containing protein At5g15010, mitochondrial [Jatropha curcas]
12 Hb_000783_020 0.0810758901 - - PREDICTED: glycerol-3-phosphate dehydrogenase SDP6, mitochondrial [Jatropha curcas]
13 Hb_007416_060 0.0818867419 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 18 [Jatropha curcas]
14 Hb_000066_080 0.0836231625 - - PREDICTED: mRNA cap guanine-N7 methyltransferase 2 isoform X2 [Jatropha curcas]
15 Hb_000003_250 0.0847056373 - - glycerol-3-phosphate dehydrogenase, putative [Ricinus communis]
16 Hb_000471_110 0.0854208525 - - PREDICTED: pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Jatropha curcas]
17 Hb_001352_020 0.0860434718 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 8, mitochondrial-like [Jatropha curcas]
18 Hb_004712_130 0.0860693283 - - PREDICTED: uncharacterized protein LOC105633074 [Jatropha curcas]
19 Hb_000009_560 0.0876437608 - - PREDICTED: extra-large guanine nucleotide-binding protein 1 [Jatropha curcas]
20 Hb_002450_020 0.0890238071 - - PREDICTED: probable transcriptional regulator SLK2 [Jatropha curcas]

Gene co-expression network

sample Hb_164010_030 Hb_164010_030 Hb_000497_300 Hb_000497_300 Hb_164010_030--Hb_000497_300 Hb_000116_260 Hb_000116_260 Hb_164010_030--Hb_000116_260 Hb_001377_490 Hb_001377_490 Hb_164010_030--Hb_001377_490 Hb_001163_100 Hb_001163_100 Hb_164010_030--Hb_001163_100 Hb_000260_010 Hb_000260_010 Hb_164010_030--Hb_000260_010 Hb_001014_030 Hb_001014_030 Hb_164010_030--Hb_001014_030 Hb_010344_050 Hb_010344_050 Hb_000497_300--Hb_010344_050 Hb_004712_130 Hb_004712_130 Hb_000497_300--Hb_004712_130 Hb_001352_020 Hb_001352_020 Hb_000497_300--Hb_001352_020 Hb_000497_300--Hb_000116_260 Hb_001789_150 Hb_001789_150 Hb_000497_300--Hb_001789_150 Hb_000116_260--Hb_001352_020 Hb_007416_060 Hb_007416_060 Hb_000116_260--Hb_007416_060 Hb_000471_110 Hb_000471_110 Hb_000116_260--Hb_000471_110 Hb_000406_130 Hb_000406_130 Hb_000116_260--Hb_000406_130 Hb_000185_040 Hb_000185_040 Hb_001377_490--Hb_000185_040 Hb_000009_560 Hb_000009_560 Hb_001377_490--Hb_000009_560 Hb_001377_490--Hb_000260_010 Hb_000003_590 Hb_000003_590 Hb_001377_490--Hb_000003_590 Hb_000003_250 Hb_000003_250 Hb_001377_490--Hb_000003_250 Hb_001163_100--Hb_000260_010 Hb_000340_230 Hb_000340_230 Hb_001163_100--Hb_000340_230 Hb_004672_040 Hb_004672_040 Hb_001163_100--Hb_004672_040 Hb_001163_100--Hb_000009_560 Hb_001163_100--Hb_001377_490 Hb_027380_220 Hb_027380_220 Hb_000260_010--Hb_027380_220 Hb_002809_050 Hb_002809_050 Hb_000260_010--Hb_002809_050 Hb_001912_110 Hb_001912_110 Hb_000260_010--Hb_001912_110 Hb_001014_030--Hb_000003_250 Hb_000840_250 Hb_000840_250 Hb_001014_030--Hb_000840_250 Hb_001633_210 Hb_001633_210 Hb_001014_030--Hb_001633_210 Hb_000614_250 Hb_000614_250 Hb_001014_030--Hb_000614_250 Hb_000297_010 Hb_000297_010 Hb_001014_030--Hb_000297_010 Hb_002450_020 Hb_002450_020 Hb_001014_030--Hb_002450_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
22.5424 23.5568 17.6663 38.5563 21.0874 34.837
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
26.9918 34.5068 61.6163 29.4325 36.2194

CAGE analysis