Hb_116349_020

Information

Type -
Description -
Location Contig116349: 2575-3854
Sequence    

Annotation

kegg
ID rcu:RCOM_0699850
description aldo-keto reductase, putative (EC:2.3.1.170)
nr
ID XP_012092025.1
description PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Jatropha curcas]
swissprot
ID Q9SQ64
description Non-functional NADPH-dependent codeinone reductase 2 OS=Papaver somniferum GN=COR2 PE=1 SV=1
trembl
ID A0A067JP40
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21760 PE=4 SV=1
Gene Ontology
ID GO:0016491
description non-functional nadph-dependent codeinone reductase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_116349_020 0.0 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Jatropha curcas]
2 Hb_001307_050 0.0711208886 - - PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Jatropha curcas]
3 Hb_000179_010 0.0842239581 - - PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
4 Hb_029991_010 0.0873828339 - - hypothetical protein PRUPE_ppa001615mg [Prunus persica]
5 Hb_004837_010 0.0886351467 - - PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Jatropha curcas]
6 Hb_000497_050 0.090037876 - - PREDICTED: photosystem II repair protein PSB27-H1, chloroplastic [Jatropha curcas]
7 Hb_146255_030 0.0929793519 transcription factor TF Family: bZIP PREDICTED: transcription factor HY5-like [Jatropha curcas]
8 Hb_000046_400 0.0933309171 - - conserved hypothetical protein [Ricinus communis]
9 Hb_004452_070 0.0949679987 transcription factor TF Family: TCP transcription factor, putative [Ricinus communis]
10 Hb_011724_040 0.0968079801 - - PREDICTED: uncharacterized protein LOC105632860 [Jatropha curcas]
11 Hb_000251_150 0.0983211738 - - PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic isoform X2 [Jatropha curcas]
12 Hb_028491_010 0.0985895026 - - hypothetical protein JCGZ_12857 [Jatropha curcas]
13 Hb_029879_020 0.0987426476 - - PREDICTED: cytochrome P450 77A1 [Jatropha curcas]
14 Hb_001277_350 0.0995287034 - - early light-induced protein, putative [Ricinus communis]
15 Hb_004338_050 0.0997612018 - - hypothetical protein POPTR_0004s02760g [Populus trichocarpa]
16 Hb_003632_020 0.1001233312 - - calcium-binding family protein [Populus trichocarpa]
17 Hb_001141_100 0.1003927159 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2-like [Jatropha curcas]
18 Hb_004032_400 0.1012119058 - - PREDICTED: uncharacterized transporter YBR287W-like [Jatropha curcas]
19 Hb_002534_020 0.1016723576 - - PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Gossypium raimondii]
20 Hb_002121_050 0.1018491683 - - hypothetical protein EUGRSUZ_D02586 [Eucalyptus grandis]

Gene co-expression network

sample Hb_116349_020 Hb_116349_020 Hb_001307_050 Hb_001307_050 Hb_116349_020--Hb_001307_050 Hb_000179_010 Hb_000179_010 Hb_116349_020--Hb_000179_010 Hb_029991_010 Hb_029991_010 Hb_116349_020--Hb_029991_010 Hb_004837_010 Hb_004837_010 Hb_116349_020--Hb_004837_010 Hb_000497_050 Hb_000497_050 Hb_116349_020--Hb_000497_050 Hb_146255_030 Hb_146255_030 Hb_116349_020--Hb_146255_030 Hb_001307_050--Hb_000179_010 Hb_001307_050--Hb_000497_050 Hb_001307_050--Hb_029991_010 Hb_001307_050--Hb_146255_030 Hb_001307_050--Hb_004837_010 Hb_004338_050 Hb_004338_050 Hb_001307_050--Hb_004338_050 Hb_000179_010--Hb_004837_010 Hb_000251_150 Hb_000251_150 Hb_000179_010--Hb_000251_150 Hb_158001_010 Hb_158001_010 Hb_000179_010--Hb_158001_010 Hb_000046_400 Hb_000046_400 Hb_000179_010--Hb_000046_400 Hb_000179_010--Hb_029991_010 Hb_131466_010 Hb_131466_010 Hb_029991_010--Hb_131466_010 Hb_004607_110 Hb_004607_110 Hb_029991_010--Hb_004607_110 Hb_028491_010 Hb_028491_010 Hb_029991_010--Hb_028491_010 Hb_029991_010--Hb_000497_050 Hb_004032_400 Hb_004032_400 Hb_004837_010--Hb_004032_400 Hb_004837_010--Hb_158001_010 Hb_085682_010 Hb_085682_010 Hb_004837_010--Hb_085682_010 Hb_004837_010--Hb_146255_030 Hb_002752_020 Hb_002752_020 Hb_000497_050--Hb_002752_020 Hb_001277_350 Hb_001277_350 Hb_000497_050--Hb_001277_350 Hb_000497_050--Hb_004338_050 Hb_000497_050--Hb_146255_030 Hb_002121_050 Hb_002121_050 Hb_000497_050--Hb_002121_050 Hb_146255_030--Hb_004032_400 Hb_146255_030--Hb_002752_020 Hb_002534_020 Hb_002534_020 Hb_146255_030--Hb_002534_020 Hb_146255_030--Hb_001277_350
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0229141 0.0460037 1.01143 0.858467 0 0.0201927
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 2.36054

CAGE analysis